RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SNAP47Q5SQN1 464 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 NBPF12Q5TAG4 269 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 FBXL19Q6PCT2 694 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 SLCO6A1Q86UG4 719 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 KBTBD4Q9NVX7 518 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 ERVK13-1Q9NX77 482 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 CNOT11Q9UKZ1 510 aaKnown RBP4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 PLA2G2DQ9UNK4 145 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 DUSP10Q9Y6W6 482 aa4.22□□□□□ -1.73
DEPDC1B-204ENST00000509006 MINDY4BA8MYZ0 360 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 MSL3P1P0C860 447 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 RNF4P78317 190 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 CAP1Q01518 475 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 CBX2Q14781 532 aaPredicted RBP4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 NBPF9Q3BBW0 867 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 ARSHQ5FYA8 562 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 CDCP2Q5VXM1 449 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 LIPIQ6XZB0 460 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 NLGN1Q8N2Q7 840 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 SLC16A11Q8NCK7 471 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 DDX1Q92499 740 aaKnown RBP4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 COPRSQ9NQ92 184 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 IMPACTQ9P2X3 320 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 SUSD2Q9UGT4 822 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 SRRDQ9UH36 339 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 HCFC2Q9Y5Z7 792 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 ROBO2Q9HCK4 1378 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 IRS2Q9Y4H2 1338 aa4.21□□□□□ -1.74
DEPDC1B-204ENST00000509006 OVOL3O00110 214 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 MEIS1O00470 390 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 TLR3O15455 904 aaKnown RBP4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 FSHBP01225 129 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 PFKLP17858 780 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 CNR2P34972 360 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 CRKP46108 304 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 OVOS1Q6IE37 1185 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 ZC3H14Q6PJT7 736 aaKnown RBP4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 FNIP1Q8TF40 1166 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 CDADC1Q9BWV3 514 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 KRTAP3-1Q9BYR8 98 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 PRDM14Q9GZV8 571 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 CNNM2Q9H8M5 875 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 BRMS1Q9HCU9 246 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 SMPD4Q9NXE4 827 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 GMIPQ9P107 970 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 VTI1BQ9UEU0 232 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 ACSL6Q9UKU0 697 aa4.2□□□□□ -1.74
DEPDC1B-204ENST00000509006 SIGLEC6O43699 453 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 RAG1P15918 1043 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 FBLN1P23142 703 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 POLR2BP30876 1174 aaKnown RBP4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 EIF4A3P38919 411 aaKnown RBP4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 MAPKAPK2P49137 400 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 CWF19L2Q2TBE0 894 aaKnown RBP4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 ZNF526Q8TF50 670 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 JMJD8Q96S16 334 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 EHMT1Q9H9B1 1298 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 PCDHB14Q9Y5E9 798 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 PMF1-BGLAPU3KQ54 211 aa4.19□□□□□ -1.74
DEPDC1B-204ENST00000509006 A0A1W2PQ45 241 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 A0A1W2PQY0 241 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 ATF2P15336 505 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 CCNFP41002 786 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 CTSKP43235 329 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 HTRA3P83110 453 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 FOXO4P98177 505 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 MLECQ14165 292 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 SAPCD2Q86UD0 394 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 ATG4CQ96DT6 458 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 ZNF512BQ96KM6 892 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 SCAND2PQ9GZW5 306 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 MRS2Q9HD23 443 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 AP5S1Q9NUS5 200 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 ADAMTS1Q9UHI8 967 aa4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 SUPT16HQ9Y5B9 1047 aaKnown RBP4.18□□□□□ -1.74
DEPDC1B-204ENST00000509006 SH3D21A4FU49 640 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 ZNF205O95201 554 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 ITGB3P05106 788 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 MC3RP41968 323 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 MVKQ03426 396 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 DLX2Q07687 328 aaPredicted RBP4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 RAD51AP2Q09MP3 1159 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 CRTC3Q6UUV7 619 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 NLRC3Q7RTR2 1065 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 AEBP1Q8IUX7 1158 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 REXO1Q8N1G1 1221 aaKnown RBP4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 TMEM52Q8NDY8 209 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 ZNF296Q8WUU4 475 aaPredicted RBP4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 EAF1Q96JC9 268 aaPredicted RBP4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 CHST7Q9NS84 486 aa4.17□□□□□ -1.74
DEPDC1B-204ENST00000509006 MEIS3P2A8K0S8 358 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 TNFRSF10CO14798 259 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 NOBOXO60393 691 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 CLEC3AO75596 197 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 DBHP09172 617 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 NME1P15531 152 aaKnown RBP4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 ZNF20P17024 532 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 ERCC3P19447 782 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 BMP8BP34820 402 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms