RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 FGAP02671 866 aa16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 MCCP23508 829 aa16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 LNPKQ9C0E8 428 aa16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 IL17RBQ9NRM6 502 aa16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 TOMM22Q9NS69 142 aa16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 CCDC171Q6TFL3 1326 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 LTBP2Q14767 1821 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 LOC102724159A0A0B4J2E5 919 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 SOX1O00570 391 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 SNAI1O95863 264 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 CST5P28325 142 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 PWP2Q15269 919 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 TRIM60Q495X7 471 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 CHD1LQ86WJ1 897 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 RILPL2Q969X0 211 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 LRCH3Q96II8 777 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 PRDM5Q9NQX1 630 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 RNF146Q9NTX7 359 aa16.04■□□□□ 0.16
CCHCR1-227ENST00000508852 ELP1O95163 1332 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 A0A1W2PQ45 241 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 A0A1W2PQY0 241 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 DCDC2CA8MYV0 355 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 FOXP2O15409 715 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 PGK1P00558 417 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 CLTBP09497 229 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 TAL1P17542 331 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 CCDC96Q2M329 555 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 FAM109BQ6ICB4 259 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 ARMCX2Q7L311 632 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 KLHDC9Q8NEP7 349 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 FERMT2Q96AC1 680 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 FAM227BQ96M60 508 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 SEZ6LQ9BYH1 1024 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 STARD7Q9NQZ5 370 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 PRR12Q9ULL5 1215 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 LAMA3Q16787 3333 aa16.03■□□□□ 0.16
CCHCR1-227ENST00000508852 SYNRGQ9UMZ2 1314 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 A0A0D9SFI3 127 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 ICAM1P05362 532 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 ACLYP53396 1101 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 GJA9P57773 515 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 NUCB1Q02818 461 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 BTNL9Q6UXG8 535 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 KCTD1Q719H9 257 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 ANKRD33Q7Z3H0 272 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 DEFB123Q8N688 67 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 FAM133AQ8N9E0 248 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 ESR2Q92731 530 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 MPHOSPH6Q99547 160 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 MAF1Q9H063 256 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 PDLIM7Q9NR12 457 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 ADD3Q9UEY8 706 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-227ENST00000508852 ZNF536O15090 1300 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 MCM3APO60318 1980 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 ZNF213O14771 459 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 ALAS1P13196 640 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 SDSP20132 328 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 NKX3-2P78367 333 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 TLE2Q04725 743 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 CCDC144CPQ8IYA2 1237 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 RANBP17Q9H2T7 1088 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 A1CFQ9NQ94 594 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 CCPG1Q9ULG6 757 aa16.01■□□□□ 0.15
CCHCR1-227ENST00000508852 KIAA0355O15063 1070 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 ZEB2O60315 1214 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 NMT2O60551 498 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 CABYRO75952 493 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
CCHCR1-227ENST00000508852 KCNA10Q16322 511 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 CCDC174Q6PII3 467 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 IQCA1Q86XH1 822 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 PLEKHM2Q8IWE5 1019 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 TMEM47Q9BQJ4 181 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 Q9Y3F1 56 aa16■□□□□ 0.15
CCHCR1-227ENST00000508852 B4DLN1 442 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 RAG1P15918 1043 aa15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 MRPL12P52815 198 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-227ENST00000508852 TNFAIP2Q03169 654 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms