RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
POLR2J3-213ENST00000508848 USP26Q9BXU7 913 aa12.39□□□□□ -0.43
POLR2J3-213ENST00000508848 TM6SF1Q9BZW5 370 aa12.39□□□□□ -0.43
POLR2J3-213ENST00000508848 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
POLR2J3-213ENST00000508848 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
POLR2J3-213ENST00000508848 GJB1P08034 283 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 PARP1P09874 1014 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 CALM1P0DP23 149 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 CALM2P0DP24 149 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 CALM3P0DP25 149 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 PLS1Q14651 629 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 KCTD2Q14681 263 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 TMEM67Q5HYA8 995 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 SNRNP48Q6IEG0 339 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 LY9Q9HBG7 655 aa12.38□□□□□ -0.43
POLR2J3-213ENST00000508848 BAZ2BQ9UIF8 2168 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 CCDC85CA6NKD9 419 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 PRC1O43663 620 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 PEX10O60683 326 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 DDAH1O94760 285 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 PSMA5P28066 241 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 ADORA2AP29274 412 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 GNAQP50148 359 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 GRM4Q14833 912 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 CCDC96Q2M329 555 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 ZNF792Q3KQV3 632 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 MAMDC4Q6UXC1 1216 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 DPP9Q86TI2 863 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 RIOX1Q9H6W3 641 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 CWC22Q9HCG8 908 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 PAK6Q9NQU5 681 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 MAP3K20Q9NYL2 800 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 PFASO15067 1338 aa12.37□□□□□ -0.43
POLR2J3-213ENST00000508848 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 SH2B2O14492 632 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 COBLO75128 1261 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 KIF5BP33176 963 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 EVCP57679 992 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 ANAPC15P60006 121 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 IKQ13123 557 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 MFSD14CQ5VZR4 134 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 CPXCR1Q8N123 301 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 MMP19Q99542 508 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 MAD2L2Q9UI95 211 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
POLR2J3-213ENST00000508848 BRCA2P51587 3418 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 TNRC18O15417 2968 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 MSCO60682 206 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 INHAP05111 366 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 CYP2B6P20813 491 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 GJA8P48165 433 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 GHRHRQ02643 423 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 NPLOC4Q8TAT6 608 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 SH3TC2Q8TF17 1288 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 TRIB2Q92519 343 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 RAVER2Q9HCJ3 691 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
POLR2J3-213ENST00000508848 SGPL1O95470 568 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 CCL5P13501 91 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 ELNP15502 786 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 SLC16A2P36021 539 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 WDR78Q5VTH9 848 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 FAM133AQ8N9E0 248 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 ANKLE1Q8NAG6 615 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 MAML3Q96JK9 1138 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 AGBL1Q96MI9 1066 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 TRERF1Q96PN7 1200 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 BIN2Q9UBW5 565 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 PDE4DIPQ5VU43 2346 aa12.34□□□□□ -0.43
POLR2J3-213ENST00000508848 CCDC69A6NI79 296 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 ZBTB5O15062 677 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 CACNB2Q08289 660 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 SYNE3Q6ZMZ3 975 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 CHST3Q7LGC8 479 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms