RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MOV10L1Q9BXT6 1211 aaKnown RBP10.64□□□□□ -0.71
NUP54-207ENST00000508583 MCOLN1Q9GZU1 580 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 RANBP17Q9H2T7 1088 aaKnown RBP10.64□□□□□ -0.71
NUP54-207ENST00000508583 RBM28Q9NW13 759 aaKnown RBP10.64□□□□□ -0.71
NUP54-207ENST00000508583 ZNF214Q9UL59 606 aaPredicted RBP10.64□□□□□ -0.71
NUP54-207ENST00000508583 PTPN22Q9Y2R2 807 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
NUP54-207ENST00000508583 KLRF2D3W0D1 207 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 ZBTB43O43298 467 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 XRCC5P13010 732 aaKnown RBP10.63□□□□□ -0.71
NUP54-207ENST00000508583 SMARCA1P28370 1054 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 CTGFP29279 349 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 PRKCZQ05513 592 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 KCTD2Q14681 263 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 ANKRD1Q15327 319 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 SLC9C1Q4G0N8 1177 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 CPXCR1Q8N123 301 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 REPS2Q8NFH8 660 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 PXYLP1Q8TE99 480 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 APBA2Q99767 749 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 MAF1Q9H063 256 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 PORCNQ9H237 461 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 CCPG1Q9ULG6 757 aa10.63□□□□□ -0.71
NUP54-207ENST00000508583 PFASO15067 1338 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 HTTP42858 3142 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
NUP54-207ENST00000508583 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 GOLGA8HP0CJ92 632 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 PTPREP23469 700 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 SLC16A2P36021 539 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 FLT3LGP49771 235 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 UBXN2AP68543 259 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 GRB14Q14449 540 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 TTBK2Q6IQ55 1244 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 APOA5Q6Q788 366 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 Q6ZUG5 572 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
NUP54-207ENST00000508583 DPP9Q86TI2 863 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 ADGRF4Q8IZF3 695 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 IL17RAQ96F46 866 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 MMP19Q99542 508 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 ACAD9Q9H845 621 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 RAVER2Q9HCJ3 691 aaKnown RBP10.62□□□□□ -0.71
NUP54-207ENST00000508583 SEC63Q9UGP8 760 aaKnown RBP10.62□□□□□ -0.71
NUP54-207ENST00000508583 MAD2L2Q9UI95 211 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 ZNF236Q9UL36 1845 aa10.62□□□□□ -0.71
NUP54-207ENST00000508583 KLF18A0A0U1RQI7 1052 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 ZBTB5O15062 677 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 GRK4P32298 578 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 CDC37Q16543 378 aaPredicted RBP10.61□□□□□ -0.71
NUP54-207ENST00000508583 RTN1Q16799 776 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 MORN1Q5T089 497 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 RASGRP2Q7LDG7 609 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 ANKRD35Q8N283 1001 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 FANCBQ8NB91 859 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 RRP36Q96EU6 259 aaKnown RBP10.61□□□□□ -0.71
NUP54-207ENST00000508583 DDX11Q96FC9 970 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 TRERF1Q96PN7 1200 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 SPZ1Q9BXG8 430 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 LRRC2Q9BYS8 371 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 AGXT2Q9BYV1 514 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 PDRG1Q9NUG6 133 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 BIN2Q9UBW5 565 aaPredicted RBP10.61□□□□□ -0.71
NUP54-207ENST00000508583 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
NUP54-207ENST00000508583 DIS3Q9Y2L1 958 aaKnown RBP10.61□□□□□ -0.71
NUP54-207ENST00000508583 PTCH2Q9Y6C5 1203 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 DOCK3Q8IZD9 2030 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
NUP54-207ENST00000508583 ABCB11O95342 1321 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 GOLGA8AA7E2F4 631 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 GOLGA8BA8MQT2 603 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 ADCY3O60266 1144 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 HMGCRP04035 888 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 HOXC6P09630 235 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 ALAS1P13196 640 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 ADORA2AP29274 412 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 METAP2P50579 478 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUP54-207ENST00000508583 MFSD14CQ5VZR4 134 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 CPLX2Q6PUV4 134 aaKnown RBP10.6□□□□□ -0.71
NUP54-207ENST00000508583 FBXO11Q86XK2 927 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 MCF2L2Q86YR7 1114 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 MSL3Q8N5Y2 521 aaKnown RBP10.6□□□□□ -0.71
NUP54-207ENST00000508583 SAMD3Q8N6K7 520 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 BRF1Q92994 677 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 TCEANC2Q96MN5 208 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 MPHOSPH6Q99547 160 aaKnown RBP10.6□□□□□ -0.71
NUP54-207ENST00000508583 AMNQ9BXJ7 453 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 C22orf23Q9BZE7 217 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 UPF3BQ9BZI7 483 aaKnown RBP10.6□□□□□ -0.71
NUP54-207ENST00000508583 UBA5Q9GZZ9 404 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 RIOX1Q9H6W3 641 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 SENP2Q9HC62 589 aa10.6□□□□□ -0.71
NUP54-207ENST00000508583 HOMER2Q9NSB8 354 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms