RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PANK1Q8TE04 598 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 IRAK3Q9Y616 596 aa6.65□□□□□ -1.34
PDLIM5-211ENST00000508531 ZNF608Q9ULD9 1512 aaPredicted RBP6.65□□□□□ -1.35
PDLIM5-211ENST00000508531 WTIPA6NIX2 430 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 VAV1P15498 845 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 PRKCAP17252 672 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 CEBPAP49715 358 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 ERVFRD-1P60508 538 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 TCERG1LQ5VWI1 586 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 TDRD10Q5VZ19 366 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 CCDC144CPQ8IYA2 1237 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 SIGLEC10Q96LC7 697 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 DSCC1Q9BVC3 393 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 ZCCHC4Q9H5U6 513 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 SUCOQ9UBS9 1254 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 ZNRF3Q9ULT6 936 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 FANCD2Q9BXW9 1451 aa6.64□□□□□ -1.35
PDLIM5-211ENST00000508531 B8ZZF3 427 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 SHOXO15266 292 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 ZNF16P17020 682 aaPredicted RBP6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 ENDOUP21128 410 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 ZNF76P36508 570 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 CTSWP56202 376 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 YBX1P67809 324 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 SLCO6A1Q86UG4 719 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 USP48Q86UV5 1035 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 C7orf61Q8IZ16 206 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 NUP43Q8NFH3 380 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 DHRS1Q96LJ7 313 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 C20orf173Q96LM9 149 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 KLHL14Q9P2G3 628 aa6.63□□□□□ -1.35
PDLIM5-211ENST00000508531 NCANO14594 1321 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 PRRG2O14669 202 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 N4BP3O15049 544 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 MPOP05164 745 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 GSNP06396 782 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 ARL4AP40617 200 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 CDR1P51861 262 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 CYP4F8P98187 520 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 ZNF394Q53GI3 561 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 RTP2Q5QGT7 225 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 INTS3Q68E01 1043 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 PPFIBP1Q86W92 1011 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 TMEM52Q8NDY8 209 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 FERD3LQ96RJ6 166 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 PCDHGB7Q9Y5F8 929 aa6.62□□□□□ -1.35
PDLIM5-211ENST00000508531 URB2Q14146 1524 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 A0A1W2PQ45 241 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 A0A1W2PQY0 241 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 NUDT19A8MXV4 375 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 ABLIM1O14639 778 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 GSTM1P09488 218 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 PMS1P54277 932 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 LAPTM5Q13571 262 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 RAB3GAP1Q15042 981 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 FBXW10Q5XX13 1052 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 DCAF15Q66K64 600 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 OLFML2BQ68BL8 750 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 TMC6Q7Z403 805 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 TMEM151BQ8IW70 566 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 JMJD8Q96S16 334 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 BACH2Q9BYV9 841 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 FAM86C1Q9NVL1 165 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 IMPACTQ9P2X3 320 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 ACSL6Q9UKU0 697 aa6.61□□□□□ -1.35
PDLIM5-211ENST00000508531 H0Y8X5 98 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 TRIM13O60858 407 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 IMPDH2P12268 514 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 AFF3P51826 1226 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 FANCCQ00597 558 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 NAT16Q8N8M0 369 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 MARCH10Q8NA82 808 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 KCNC2Q96PR1 638 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 SLC12A9Q9BXP2 914 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 EPB41L4AQ9HCS5 686 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 TNFRSF12AQ9NP84 129 aa6.6□□□□□ -1.35
PDLIM5-211ENST00000508531 IRS4O14654 1257 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 TP53P04637 393 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 BUD31P41223 144 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 ZYXQ15942 572 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 AXDND1Q5T1B0 1012 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 CWF19L1Q69YN2 538 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 RUFY4Q6ZNE9 571 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 TMEFF1Q8IYR6 380 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 MZB1Q8WU39 189 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 SMARCC1Q92922 1105 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 BRF1Q92994 677 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 DACT3Q96B18 629 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 TM9SF2Q99805 663 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 ANP32EQ9BTT0 268 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 PPT2Q9UMR5 302 aa6.59□□□□□ -1.35
PDLIM5-211ENST00000508531 A0A0G2JLL6 359 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-211ENST00000508531 A0A1W2PQ27 194 aa6.58□□□□□ -1.36
PDLIM5-211ENST00000508531 A0A1W2PQ64 194 aa6.58□□□□□ -1.36
PDLIM5-211ENST00000508531 A0A1W2PQC6 194 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms