RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 STXBP3O00186 592 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 LMNB2Q03252 620 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 CCDC144BQ3MJ40 725 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 PALM2Q8IXS6 379 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 RWDD2AQ9UIY3 292 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 KDM5BQ9UGL1 1544 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 KDM5AP29375 1690 aaKnown RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 KDM5CP41229 1560 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ABCC1P33527 1531 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 CYP2E1P05181 493 aaPredicted RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 PDIA3P30101 505 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 IL13P35225 146 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 LONP1P36776 959 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 MRPL12P52815 198 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 CUL3Q13618 768 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 PLCB4Q15147 1175 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ZNF827Q17R98 1081 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 GNPTABQ3T906 1256 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 TMTC3Q6ZXV5 915 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 OGFOD1Q8N543 542 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 DBNDD2Q9BQY9 259 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 TUBGCP2Q9BSJ2 902 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 MAN1B1Q9UKM7 699 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 PLAAQ9Y263 795 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ADGRL2O95490 1459 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 RASGRF2O14827 1237 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 RASSF7Q02833 373 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 GOLGA8FQ08AF8 430 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 GOLGA8DPQ0D2H9 430 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ARID5BQ14865 1188 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 MYOCDQ8IZQ8 938 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 CNPY4Q8N129 248 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 NSUN7Q8NE18 718 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 HAUS8Q9BT25 410 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 NT5C3AQ9H0P0 336 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 KCNF1Q9H3M0 494 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 CD2APQ9Y5K6 639 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 PLXNC1O60486 1568 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 CARMIL3Q8ND23 1372 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 EIF3HO15372 352 aaKnown RBP eCLIP8□□□□□ -1.13
UBE2D3-224ENST00000508474 MBD4O95243 580 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 PARP1P09874 1014 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 PPP2R2AP63151 447 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ARHGAP4P98171 946 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8□□□□□ -1.13
UBE2D3-224ENST00000508474 JARID2Q92833 1246 aaPredicted RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 VTI1AQ96AJ9 217 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ANKIB1Q9P2G1 1089 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 KCNJ14Q9UNX9 436 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ATP8A1Q9Y2Q0 1164 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ARHGAP10A1A4S6 786 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 CCNT1O60563 726 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 STK10O94804 968 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 KRT5P13647 590 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 HERC4Q5GLZ8 1057 aaPredicted RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 ZNF710Q8N1W2 664 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 ATP6V1G3Q96LB4 118 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 EPN3Q9H201 632 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 TMEM60Q9H2L4 133 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 THAP9Q9H5L6 903 aa8□□□□□ -1.13
UBE2D3-224ENST00000508474 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 DIS3Q9Y2L1 958 aaKnown RBP8□□□□□ -1.13
UBE2D3-224ENST00000508474 RAPGEF6Q8TEU7 1601 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 USP27XA6NNY8 438 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 MMEP08473 750 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 XRCC5P13010 732 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 ZC3H18Q86VM9 953 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 DZIP3Q86Y13 1208 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 CCDC89Q8N998 374 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 SNX29Q8TEQ0 813 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 CCT6BQ92526 530 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 ZMYND12Q9H0C1 365 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 FOXP1Q9H334 677 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 METTL14Q9HCE5 456 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 PRDM11Q9NQV5 511 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 EPS15L1Q9UBC2 864 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 EXOC7Q9UPT5 735 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 KDM3AQ9Y4C1 1321 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 ARHGAP31Q2M1Z3 1444 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 A0A0D9SFI3 127 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 IDI1Q13907 227 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 ZNF658Q5TYW1 1059 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 MORC4Q8TE76 937 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 HNRNPLLQ8WVV9 542 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 FMO2Q99518 471 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 ELAC2Q9BQ52 826 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 NBPF3Q9H094 633 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 NHEJ1Q9H9Q4 299 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 XAB2Q9HCS7 855 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 PHF8Q9UPP1 1060 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 SYNMO15061 1565 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 LMNB1P20700 586 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 SNX16P57768 344 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 TOGARAM2Q6ZUX3 1019 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 CNOT6LQ96LI5 555 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 OSBPL1AQ9BXW6 950 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 PACSIN2Q9UNF0 486 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 SATB2Q9UPW6 733 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms