RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 TRIM43Q96BQ3 446 aaPredicted RBP15.32■□□□□ 0.04
SH3TC1-215ENST00000508438 FAM227BQ96M60 508 aa15.32■□□□□ 0.04
SH3TC1-215ENST00000508438 HOMER2Q9NSB8 354 aa15.32■□□□□ 0.04
SH3TC1-215ENST00000508438 MTMR10Q9NXD2 777 aa15.32■□□□□ 0.04
SH3TC1-215ENST00000508438 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.32■□□□□ 0.04
SH3TC1-215ENST00000508438 FAM184BQ9ULE4 1060 aa15.32■□□□□ 0.04
SH3TC1-215ENST00000508438 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
SH3TC1-215ENST00000508438 ORC4O43929 436 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 PLA2G6O60733 806 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 CNTN2Q02246 1040 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 ACVR2BQ13705 512 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 PPP4R3BQ5MIZ7 849 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 RCSD1Q6JBY9 416 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 BADQ92934 168 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 AGBL1Q96MI9 1066 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 TSEN34Q9BSV6 310 aaKnown RBP15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 LCTP09848 1927 aa15.31■□□□□ 0.04
SH3TC1-215ENST00000508438 MYADML2A6NDP7 307 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 LRRC37A2A6NM11 1700 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 DUSP11O75319 330 aaKnown RBP15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 FGAP02671 866 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 LAMA2P24043 3122 aaKnown RBP15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 ACLYP53396 1101 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 IKQ13123 557 aaPredicted RBP15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 C9orf50Q5SZB4 431 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 CCSAPQ6IQ19 270 aaPredicted RBP15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 ARMCX2Q7L311 632 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 LNPKQ9C0E8 428 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 KATNBL1Q9H079 304 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 ABHD16BQ9H3Z7 469 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 ACAD9Q9H845 621 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 A1CFQ9NQ94 594 aaKnown RBP15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 RNF146Q9NTX7 359 aa15.3■□□□□ 0.04
SH3TC1-215ENST00000508438 POTEB2H3BUK9 544 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 CLTBP09497 229 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 HSPD1P10809 573 aaKnown RBP15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 ITGB8P26012 769 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 SNAP25P60880 206 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 NMIQ13287 307 aaPredicted RBP15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 SHHQ15465 462 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 KCNA10Q16322 511 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 CCDC144BQ3MJ40 725 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 SMC5Q8IY18 1101 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 TRERF1Q96PN7 1200 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 STARD7Q9NQZ5 370 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 PRR12Q9ULL5 1215 aa15.29■□□□□ 0.04
SH3TC1-215ENST00000508438 ZMYM6O95789 1325 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 SOWAHBA6NEL2 793 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 MOXD2PA6NHM9 499 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 KIAA0355O15063 1070 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 ALAS1P13196 640 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 CST5P28325 142 aaPredicted RBP15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 TKFCQ3LXA3 575 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 CCDC174Q6PII3 467 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 NUP133Q8WUM0 1156 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 UPF3AQ9H1J1 476 aaKnown RBP15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
SH3TC1-215ENST00000508438 ASTN1O14525 1302 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 CCDC171Q6TFL3 1326 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 C6orf222P0C671 652 aaPredicted RBP15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 GJA9P57773 515 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 FAAP100Q0VG06 881 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 AAMPQ13685 434 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 MUM1L1Q5H9M0 696 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 RRP12Q5JTH9 1297 aaKnown RBP15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 ANKRD33Q7Z3H0 272 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 DCAF4Q8WV16 495 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 TMEM47Q9BQJ4 181 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 TOMM22Q9NS69 142 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.04
SH3TC1-215ENST00000508438 ELP1O95163 1332 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 CTAGE5O15320 804 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 IGHDP01880 384 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 ASGR1P07306 291 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 EPHB4P54760 987 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 HAND2P61296 217 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 CCDC96Q2M329 555 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 B4GALNT3Q6L9W6 998 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 BTNL9Q6UXG8 535 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 PCSK9Q8NBP7 692 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 RILPL2Q969X0 211 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 TOX2Q96NM4 488 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 RANBP17Q9H2T7 1088 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 TCP11L1Q9NUJ3 509 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 CYP39A1Q9NYL5 469 aa15.26■□□□□ 0.03
SH3TC1-215ENST00000508438 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms