RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 DHRS4Q9BTZ2 278 aa2.62□□□□□ -1.99
SMN2-208ENST00000508258 KLHL25Q9H0H3 589 aa2.62□□□□□ -1.99
SMN2-208ENST00000508258 CARS2Q9HA77 564 aaKnown RBP2.62□□□□□ -1.99
SMN2-208ENST00000508258 ATP13A1Q9HD20 1204 aa2.62□□□□□ -1.99
SMN2-208ENST00000508258 ZSWIM5Q9P217 1185 aa2.62□□□□□ -1.99
SMN2-208ENST00000508258 PITPNM2Q9BZ72 1349 aa2.62□□□□□ -1.99
SMN2-208ENST00000508258 A0A087X0B3 334 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 PLD2O14939 933 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 SHOXO15266 292 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 KCNQ2O43526 872 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 CLEC3AO75596 197 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 FARP2O94887 1054 aaPredicted RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 TP53P04637 393 aaPredicted RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 ITGAVP06756 1048 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 NAT2P11245 290 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 FGFR1P11362 822 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 POU3F3P20264 500 aaPredicted RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 L1CAMP32004 1257 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 GBP1P32455 592 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 AFMP43652 599 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 PABPC4Q13310 644 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMN2-208ENST00000508258 CBX2Q14781 532 aaPredicted RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 MLANAQ16655 118 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 SV2CQ496J9 727 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 FNDC3BQ53EP0 1204 aaKnown RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 FAM209AQ5JX71 171 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 NBPF12Q5TAG4 269 aaPredicted RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 YOD1Q5VVQ6 348 aaPredicted RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 TDRD10Q5VZ19 366 aaKnown RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 FAM214BQ7L5A3 538 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 ZSWIM9Q86XI8 627 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 SCUBE1Q8IWY4 988 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 NIM1KQ8IY84 436 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 POU5F2Q8N7G0 328 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 DNAJB8Q8NHS0 232 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 MFSD3Q96ES6 412 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 MRGPRX3Q96LB0 322 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 CLUHP3Q96NS8 147 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 NCOA5Q9HCD5 579 aaKnown RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 TYW1Q9NV66 732 aaKnown RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 DDX56Q9NY93 547 aaKnown RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 SLAMF8Q9P0V8 285 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 APEX2Q9UBZ4 518 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 CEP131Q9UPN4 1083 aa2.61□□□□□ -1.99
SMN2-208ENST00000508258 MRPS23Q9Y3D9 190 aaKnown RBP2.61□□□□□ -1.99
SMN2-208ENST00000508258 CARMIL2Q6F5E8 1435 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 DNAJC25-GNG10A0A024R161 153 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 A0A087WZG4 1122 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 TRBV23-1A0A0A0MS06 115 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 TRAV20A0A0B4J274 112 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 FAM83GA6ND36 823 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 AGRPO00253 132 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 MARCH6O60337 910 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 RAPGEF3O95398 923 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 PDGFRBP09619 1106 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 C6orf222P0C671 652 aaPredicted RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 CD247P20963 164 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 STAT3P40763 770 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 ETV3P41162 512 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 GRIA2P42262 883 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 PPP2R2AP63151 447 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 FZD5Q13467 585 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 AUHQ13825 339 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 HSP90AA2PQ14568 343 aaPredicted RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 C21orf62-AS1Q17RA5 79 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 PLEKHG6Q3KR16 790 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 TRIM61Q5EBN2 209 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 DCAF15Q66K64 600 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 HEATR6Q6AI08 1181 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 RNF180Q86T96 592 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 ZNF227Q86WZ6 799 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 CREG2Q8IUH2 290 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 DHX37Q8IY37 1157 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 CCDC144CPQ8IYA2 1237 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 C7orf61Q8IZ16 206 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 ARHGEF39Q8N4T4 335 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 FLAD1Q8NFF5 587 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 OSBP2Q969R2 916 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 SYTL4Q96C24 671 aaPredicted RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 RCC1LQ96I51 464 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 KIRREL1Q96J84 757 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 AARSD1Q9BTE6 412 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 MRPL4Q9BYD3 311 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 FAM126AQ9BYI3 521 aaPredicted RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 IRF2BPLQ9H1B7 796 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 CWC22Q9HCG8 908 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 INTS7Q9NVH2 962 aaKnown RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 WHRNQ9P202 907 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 CTNND2Q9UQB3 1225 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 EMC9Q9Y3B6 208 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 ZNF451Q9Y4E5 1061 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 CAPN6Q9Y6Q1 641 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.6□□□□□ -1.99
SMN2-208ENST00000508258 CNTNAP4Q9C0A0 1308 aa2.6□□□□□ -1.99
SMN2-208ENST00000508258 GSG1L2A8MUP6 293 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 RBAK-RBAKDNI3L0D1 243 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 TBX1O43435 398 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 PDE8AO60658 829 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 ZNF865P0CJ78 1059 aaPredicted RBP2.59□□□□□ -1.99
SMN2-208ENST00000508258 PABPC1P11940 636 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms