RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 TMTC3Q6ZXV5 915 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 FAM43AQ8N2R8 423 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 STAG2Q8N3U4 1231 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 FBXL16Q8N461 479 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 RRP36Q96EU6 259 aaKnown RBP10.48□□□□□ -0.73
SMAD1-207ENST00000507594 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 AGXT2Q9BYV1 514 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 ASCC2Q9H1I8 757 aaPredicted RBP10.48□□□□□ -0.73
SMAD1-207ENST00000507594 ZFYVE28Q9HCC9 887 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 PPP1R9AQ9ULJ8 1098 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 MYH6P13533 1939 aa10.48□□□□□ -0.73
SMAD1-207ENST00000507594 IGF2BP3O00425 579 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD1-207ENST00000507594 CD2BP2O95400 341 aaKnown RBP10.47□□□□□ -0.73
SMAD1-207ENST00000507594 ALDH1A1P00352 501 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 ADD1P35611 737 aaKnown RBP10.47□□□□□ -0.73
SMAD1-207ENST00000507594 FOSBP53539 338 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 SNAP25P60880 206 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 SSRP1Q08945 709 aaKnown RBP10.47□□□□□ -0.73
SMAD1-207ENST00000507594 SCRN1Q12765 414 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 PPP2R5BQ15173 497 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
SMAD1-207ENST00000507594 CPXCR1Q8N123 301 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 PRPF38AQ8NAV1 312 aaKnown RBP10.47□□□□□ -0.73
SMAD1-207ENST00000507594 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 ATG4CQ96DT6 458 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 DDX11Q96FC9 970 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 TMX3Q96JJ7 454 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 ZIC5Q96T25 663 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 MAP3K14Q99558 947 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 HOXC10Q9NYD6 342 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 PRR12Q9ULL5 1215 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
SMAD1-207ENST00000507594 BAZ2BQ9UIF8 2168 aaKnown RBP10.46□□□□□ -0.73
SMAD1-207ENST00000507594 hCG_1642624A0A1W2PR95 340 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 PALM3A6NDB9 673 aaPredicted RBP10.46□□□□□ -0.73
SMAD1-207ENST00000507594 SNHG28P0DPA3 235 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 CDC27P30260 824 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 MAP2K2P36507 400 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 HERVK_113P62684 666 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 USH1GQ495M9 461 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 GPAT2Q6NUI2 795 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 HEATR3Q7Z4Q2 680 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 ADGRF4Q8IZF3 695 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 GTF3C2Q8WUA4 911 aaPredicted RBP10.46□□□□□ -0.73
SMAD1-207ENST00000507594 PHKBQ93100 1093 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 PIGSQ96S52 555 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 P2RX7Q99572 595 aaKnown RBP10.46□□□□□ -0.73
SMAD1-207ENST00000507594 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 CCPG1Q9ULG6 757 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.73
SMAD1-207ENST00000507594 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.46□□□□□ -0.73
SMAD1-207ENST00000507594 MYPNQ86TC9 1320 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 CNTNAP5Q8WYK1 1306 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 PTPDC1A2A3K4 754 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
SMAD1-207ENST00000507594 DTNBO60941 627 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 TRPA1O75762 1119 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 HOXA7P31268 230 aaPredicted RBP10.45□□□□□ -0.74
SMAD1-207ENST00000507594 EVCP57679 992 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 MOGSQ13724 837 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 TRIM29Q14134 588 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
SMAD1-207ENST00000507594 SRBD1Q8N5C6 995 aaKnown RBP10.45□□□□□ -0.74
SMAD1-207ENST00000507594 ANKRD13CQ8N6S4 541 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 WASF1Q92558 559 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 SNX21Q969T3 373 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 PTPN18Q99952 460 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 SPZ1Q9BXG8 430 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 RAVER2Q9HCJ3 691 aaKnown RBP10.45□□□□□ -0.74
SMAD1-207ENST00000507594 HOMER2Q9NSB8 354 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
SMAD1-207ENST00000507594 CPA4Q9UI42 421 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 SLC45A1Q9Y2W3 748 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 KIF3AQ9Y496 699 aa10.45□□□□□ -0.74
SMAD1-207ENST00000507594 COL11A1P12107 1806 aaPredicted RBP10.44□□□□□ -0.74
SMAD1-207ENST00000507594 NID2Q14112 1375 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 VWA5AO00534 786 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 FDX1P10109 184 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 ALAS1P13196 640 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 IFNAR1P17181 557 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 XBP1P17861 261 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 TIE1P35590 1138 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 TM4SF4P48230 202 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 GCLCP48506 637 aaPredicted RBP10.44□□□□□ -0.74
SMAD1-207ENST00000507594 CCNA1P78396 465 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
SMAD1-207ENST00000507594 TRAF1Q13077 416 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 CRHR2Q13324 411 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 QRICH1Q2TAL8 776 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 NCAPG2Q86XI2 1143 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 FBXO11Q86XK2 927 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 MB21D1Q8N884 522 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 JMJD4Q9H9V9 463 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 ZCCHC17Q9NP64 241 aaKnown RBP10.44□□□□□ -0.74
SMAD1-207ENST00000507594 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
SMAD1-207ENST00000507594 V9GY48 417 aaPredicted RBP10.44□□□□□ -0.74
SMAD1-207ENST00000507594 PARP14Q460N5 1801 aa10.44□□□□□ -0.74
SMAD1-207ENST00000507594 ZBTB5O15062 677 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms