RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MCCP23508 829 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 ACLYP53396 1101 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 PDE1AP54750 535 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 ACVR2BQ13705 512 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 CHURC1Q8WUH1 139 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 TSEN34Q9BSV6 310 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 ACAD9Q9H845 621 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 STARD7Q9NQZ5 370 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 RNF146Q9NTX7 359 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
HMGCS1-204ENST00000507293 ZNF536O15090 1300 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 ADCY6O43306 1168 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 RANBP6O60518 1105 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 ITGB8P26012 769 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 SNAP25P60880 206 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 KCTD1Q719H9 257 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 KLHDC9Q8NEP7 349 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 AGBL1Q96MI9 1066 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 ABHD16BQ9H3Z7 469 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 HELLSQ9NRZ9 838 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 MTMR7Q9Y216 660 aa13.67□□□□□ -0.22
HMGCS1-204ENST00000507293 A0A0D9SFI3 127 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 ORC4O43929 436 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 ALAS1P13196 640 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 KCNA10Q16322 511 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 CCDC144BQ3MJ40 725 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 FAM109BQ6ICB4 259 aaPredicted RBP13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 CCSAPQ6IQ19 270 aaPredicted RBP13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 CCDC144CPQ8IYA2 1237 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 FAM133AQ8N9E0 248 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 FAM161BQ96MY7 647 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 A1CFQ9NQ94 594 aaKnown RBP13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
HMGCS1-204ENST00000507293 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 KIAA0355O15063 1070 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 PLA2G6O60733 806 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 RAG1P15918 1043 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 CST5P28325 142 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 NOVP48745 357 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 ALX1Q15699 326 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 CCDC96Q2M329 555 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 MCMDC2Q4G0Z9 681 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 ZNF697Q5TEC3 545 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 GUCD1Q96NT3 240 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 TRERF1Q96PN7 1200 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 LNPKQ9C0E8 428 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 KATNBL1Q9H079 304 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
HMGCS1-204ENST00000507293 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.23
HMGCS1-204ENST00000507293 ASGR1P07306 291 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 FGRP09769 529 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 EPHB4P54760 987 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 GJA9P57773 515 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 FAAP100Q0VG06 881 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 PCSK9Q8NBP7 692 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 DCAF4Q8WV16 495 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 SPC25Q9HBM1 224 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 ASTN1O14525 1302 aa13.64□□□□□ -0.23
HMGCS1-204ENST00000507293 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 ASB14A6NK59 587 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 DCDC2CA8MYV0 355 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 DLL1O00548 723 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 FGAP02671 866 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 SLC16A2P36021 539 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 TTBK2Q6IQ55 1244 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 TOX2Q96NM4 488 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 DDX49Q9Y6V7 483 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 ELP1O95163 1332 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 ZMYM6O95789 1325 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 FRMPD2Q68DX3 1309 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 CCDC171Q6TFL3 1326 aa13.63□□□□□ -0.23
HMGCS1-204ENST00000507293 CTAGE5O15320 804 aa13.62□□□□□ -0.23
HMGCS1-204ENST00000507293 HSPD1P10809 573 aaKnown RBP13.62□□□□□ -0.23
HMGCS1-204ENST00000507293 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms