RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 AATFQ9NY61 560 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLCN3-205ENST00000506924 ANGEL1Q9UNK9 670 aaKnown RBP11.48□□□□□ -0.57
CLCN3-205ENST00000506924 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 RASSF10A6NK89 507 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 AOC2O75106 756 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 RGS3P49796 1198 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 RHBDL3P58872 404 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 KCNA1Q09470 495 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 MAP3K12Q12852 859 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 ALDH16A1Q8IZ83 802 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLCN3-205ENST00000506924 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 GPATCH3Q96I76 525 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 CAPNS2Q96L46 248 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 DDX4Q9NQI0 724 aaKnown RBP11.47□□□□□ -0.57
CLCN3-205ENST00000506924 PPP2R3BQ9Y5P8 575 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 AK9Q5TCS8 1911 aa11.47□□□□□ -0.57
CLCN3-205ENST00000506924 MAST2Q6P0Q8 1798 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 WDR33Q9C0J8 1336 aaKnown RBP11.46□□□□□ -0.57
CLCN3-205ENST00000506924 WDHD1O75717 1129 aaPredicted RBP11.46□□□□□ -0.57
CLCN3-205ENST00000506924 SLURP2P0DP57 97 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 PDE6AP16499 860 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 MX1P20591 662 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 TXLNAP40222 546 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 ZNF157P51786 506 aaPredicted RBP11.46□□□□□ -0.57
CLCN3-205ENST00000506924 TTF1Q15361 905 aaPredicted RBP11.46□□□□□ -0.57
CLCN3-205ENST00000506924 SUPT20HL1Q3ZLR7 823 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 SLC9C2Q5TAH2 1124 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 SH3PXD2AQ5TCZ1 1133 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 MIGA2Q7L4E1 593 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 ZSCAN29Q8IWY8 852 aaPredicted RBP11.46□□□□□ -0.57
CLCN3-205ENST00000506924 SMC5Q8IY18 1101 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 TEX11Q8IYF3 940 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 FAM151AQ8WW52 585 aa11.46□□□□□ -0.57
CLCN3-205ENST00000506924 NOL10Q9BSC4 688 aaKnown RBP11.46□□□□□ -0.57
CLCN3-205ENST00000506924 DOCK2Q92608 1830 aa11.46□□□□□ -0.58
CLCN3-205ENST00000506924 ZNF532Q9HCE3 1301 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 USP2O75604 605 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-205ENST00000506924 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 RGMBQ6NW40 437 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 ARMC9Q7Z3E5 817 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 FAM83AQ86UY5 434 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 NLRP8Q86W28 1048 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 CHD1LQ86WJ1 897 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 PGBD3Q8N328 593 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 PI4K2BQ8TCG2 481 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 ZIC5Q96T25 663 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 NXF1Q9UBU9 619 aaKnown RBP11.45□□□□□ -0.58
CLCN3-205ENST00000506924 GNEQ9Y223 722 aaKnown RBP11.45□□□□□ -0.58
CLCN3-205ENST00000506924 PAPPA2Q9BXP8 1791 aa11.45□□□□□ -0.58
CLCN3-205ENST00000506924 DDTLA6NHG4 134 aaPredicted RBP11.44□□□□□ -0.58
CLCN3-205ENST00000506924 BAG3O95817 575 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 FKBP1BP68106 108 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 NUCB1Q02818 461 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 MAPKAPK5Q8IW41 473 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 TGFBRAP1Q8WUH2 860 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 CLMNQ96JQ2 1002 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 IDI2Q9BXS1 227 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 HCN4Q9Y3Q4 1203 aa11.44□□□□□ -0.58
CLCN3-205ENST00000506924 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 SALL3Q9BXA9 1300 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 TCRBV5S4A2TA0A5A2 114 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 ERC2O15083 957 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 CENPBP07199 599 aaPredicted RBP11.43□□□□□ -0.58
CLCN3-205ENST00000506924 ECE1P42892 770 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 PDE1AP54750 535 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 EFHC2Q5JST6 749 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 C16orf46Q6P387 395 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 TRIM22Q8IYM9 498 aa11.43□□□□□ -0.58
CLCN3-205ENST00000506924 NANOS1Q8WY41 292 aaKnown RBP11.43□□□□□ -0.58
CLCN3-205ENST00000506924 GAS2L1Q99501 681 aaPredicted RBP11.43□□□□□ -0.58
CLCN3-205ENST00000506924 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
CLCN3-205ENST00000506924 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 FAM155AB1AL88 458 aaPredicted RBP11.42□□□□□ -0.58
CLCN3-205ENST00000506924 PPFIA3O75145 1194 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 ENTPD3O75355 529 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 GLRX3O76003 335 aaKnown RBP11.42□□□□□ -0.58
CLCN3-205ENST00000506924 ADD2P35612 726 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 IREB2P48200 963 aaKnown RBP11.42□□□□□ -0.58
CLCN3-205ENST00000506924 LDLRAD1Q5T700 205 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 RASAL3Q86YV0 1011 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 HHIPL1Q96JK4 782 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 CSRNP1Q96S65 589 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLCN3-205ENST00000506924 OSBPL5Q9H0X9 879 aaPredicted RBP11.42□□□□□ -0.58
CLCN3-205ENST00000506924 ARMT1Q9H993 441 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 EGFL7Q9UHF1 273 aa11.42□□□□□ -0.58
CLCN3-205ENST00000506924 CDK5RAP2Q96SN8 1893 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 USP5P45974 858 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 IER5Q5VY09 327 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 LCORLQ8N3X6 602 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 JMYQ8N9B5 988 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 KBTBD3Q8NAB2 608 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 ZKSCAN4Q969J2 545 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-205ENST00000506924 WRNIP1Q96S55 665 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms