RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 UBE2Q1Q7Z7E8 422 aa23.21■■□□□ 1.31
SNX25-204ENST00000506896 NCAPG2Q86XI2 1143 aa23.21■■□□□ 1.31
SNX25-204ENST00000506896 APBA2Q99767 749 aa23.21■■□□□ 1.31
SNX25-204ENST00000506896 LIFRP42702 1097 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 SNRNP48Q6IEG0 339 aaKnown RBP23.2■■□□□ 1.3
SNX25-204ENST00000506896 TTBK2Q6IQ55 1244 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 DHX32Q7L7V1 743 aaKnown RBP23.2■■□□□ 1.3
SNX25-204ENST00000506896 CATIPQ7Z7H3 387 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 ABRAQ8N0Z2 381 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 CPXCR1Q8N123 301 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 DEFB118Q96PH6 123 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 CRISPLD2Q9H0B8 497 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNX25-204ENST00000506896 LY9Q9HBG7 655 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 SNX14Q9Y5W7 946 aa23.2■■□□□ 1.3
SNX25-204ENST00000506896 SH2B2O14492 632 aaPredicted RBP23.19■■□□□ 1.3
SNX25-204ENST00000506896 IGHA2P01877 340 aa23.19■■□□□ 1.3
SNX25-204ENST00000506896 SLC16A2P36021 539 aa23.19■■□□□ 1.3
SNX25-204ENST00000506896 ADCK5Q3MIX3 580 aa23.19■■□□□ 1.3
SNX25-204ENST00000506896 RAVER2Q9HCJ3 691 aaKnown RBP23.19■■□□□ 1.3
SNX25-204ENST00000506896 HMX1Q9NP08 348 aaPredicted RBP23.19■■□□□ 1.3
SNX25-204ENST00000506896 PNMA2Q9UL42 364 aa23.19■■□□□ 1.3
SNX25-204ENST00000506896 ZNF236Q9UL36 1845 aa23.19■■□□□ 1.3
SNX25-204ENST00000506896 FCER1AP12319 257 aa23.18■■□□□ 1.3
SNX25-204ENST00000506896 PSMA5P28066 241 aa23.18■■□□□ 1.3
SNX25-204ENST00000506896 CACNB2Q08289 660 aaPredicted RBP23.18■■□□□ 1.3
SNX25-204ENST00000506896 NPLOC4Q8TAT6 608 aa23.18■■□□□ 1.3
SNX25-204ENST00000506896 RANBP17Q9H2T7 1088 aaKnown RBP23.18■■□□□ 1.3
SNX25-204ENST00000506896 FLRT1Q9NZU1 646 aa23.18■■□□□ 1.3
SNX25-204ENST00000506896 FBXO40Q9UH90 709 aa23.18■■□□□ 1.3
SNX25-204ENST00000506896 CCDC69A6NI79 296 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 DDAH1O94760 285 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 GOLGA8HP0CJ92 632 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 TROAPQ12815 778 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 TKFCQ3LXA3 575 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 NFXL1Q6ZNB6 911 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 MAP3K14Q99558 947 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 SENP2Q9HC62 589 aa23.17■■□□□ 1.3
SNX25-204ENST00000506896 ICAM1P05362 532 aa23.16■■□□□ 1.3
SNX25-204ENST00000506896 PRKAR2AP13861 404 aaKnown RBP23.16■■□□□ 1.3
SNX25-204ENST00000506896 ADORA2AP29274 412 aa23.16■■□□□ 1.3
SNX25-204ENST00000506896 EXOSC10Q01780 885 aaKnown RBP23.16■■□□□ 1.3
SNX25-204ENST00000506896 KCTD2Q14681 263 aa23.16■■□□□ 1.3
SNX25-204ENST00000506896 ZNF654Q8IZM8 581 aa23.16■■□□□ 1.3
SNX25-204ENST00000506896 CHST13Q8NET6 341 aa23.16■■□□□ 1.3
SNX25-204ENST00000506896 JAKMIP1Q96N16 626 aaKnown RBP23.16■■□□□ 1.3
SNX25-204ENST00000506896 SLC5A4Q9NY91 659 aa23.16■■□□□ 1.3
SNX25-204ENST00000506896 ZNF536O15090 1300 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 COBLO75128 1261 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 TFRCP02786 760 aaKnown RBP23.15■■□□□ 1.3
SNX25-204ENST00000506896 CALM1P0DP23 149 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 CALM2P0DP24 149 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 CALM3P0DP25 149 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 COL9A3Q14050 684 aaPredicted RBP23.15■■□□□ 1.3
SNX25-204ENST00000506896 GRM4Q14833 912 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 PRPF38BQ5VTL8 546 aaKnown RBP23.15■■□□□ 1.3
SNX25-204ENST00000506896 CCDC174Q6PII3 467 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.15■■□□□ 1.34e-6■□□□□ 8.6
SNX25-204ENST00000506896 SGMS1Q86VZ5 419 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 MMP19Q99542 508 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 RIPK3Q9Y572 518 aa23.15■■□□□ 1.3
SNX25-204ENST00000506896 PALM3A6NDB9 673 aaPredicted RBP23.14■■□□□ 1.29
SNX25-204ENST00000506896 KLRF2D3W0D1 207 aa23.14■■□□□ 1.29
SNX25-204ENST00000506896 DPP9Q86TI2 863 aa23.14■■□□□ 1.29
SNX25-204ENST00000506896 UBA5Q9GZZ9 404 aa23.14■■□□□ 1.29
SNX25-204ENST00000506896 GPHNQ9NQX3 736 aaPredicted RBP23.14■■□□□ 1.29
SNX25-204ENST00000506896 MAD2L2Q9UI95 211 aa23.14■■□□□ 1.29
SNX25-204ENST00000506896 CCPG1Q9ULG6 757 aa23.14■■□□□ 1.29
SNX25-204ENST00000506896 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
SNX25-204ENST00000506896 SLC12A7Q9Y666 1083 aa23.14■■□□□ 1.29
SNX25-204ENST00000506896 KIF5BP33176 963 aa23.13■■□□□ 1.29
SNX25-204ENST00000506896 SLC4A3P48751 1232 aa23.13■■□□□ 1.29
SNX25-204ENST00000506896 ADGRF4Q8IZF3 695 aa23.13■■□□□ 1.29
SNX25-204ENST00000506896 CTCFLQ8NI51 663 aaPredicted RBP23.13■■□□□ 1.29
SNX25-204ENST00000506896 AGBL1Q96MI9 1066 aa23.13■■□□□ 1.29
SNX25-204ENST00000506896 LRRC2Q9BYS8 371 aa23.13■■□□□ 1.29
SNX25-204ENST00000506896 ACAD9Q9H845 621 aa23.13■■□□□ 1.29
SNX25-204ENST00000506896 DHX16O60231 1041 aaKnown RBP23.12■■□□□ 1.29
SNX25-204ENST00000506896 CCND3P30281 292 aaPredicted RBP23.12■■□□□ 1.29
SNX25-204ENST00000506896 SNAP25P60880 206 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 FGD1P98174 961 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 MFSD14CQ5VZR4 134 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 OLFML2BQ68BL8 750 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 SYNE3Q6ZMZ3 975 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 STAG2Q8N3U4 1231 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 NUP133Q8WUM0 1156 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 TM6SF1Q9BZW5 370 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 RNF146Q9NTX7 359 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 OGDHLQ9ULD0 1010 aa23.12■■□□□ 1.29
SNX25-204ENST00000506896 FARP2O94887 1054 aaPredicted RBP23.11■■□□□ 1.29
SNX25-204ENST00000506896 ALAS1P13196 640 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 CASTP20810 708 aaKnown RBP23.11■■□□□ 1.29
SNX25-204ENST00000506896 RPS6KB1P23443 525 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 ANAPC15P60006 121 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 CDC37Q16543 378 aaPredicted RBP23.11■■□□□ 1.29
SNX25-204ENST00000506896 LHX8Q68G74 356 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 FBXL16Q8N461 479 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 ANKLE1Q8NAG6 615 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 LZTS2Q9BRK4 669 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms