RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CCDC196A0A1B0GTZ2 297 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 LARGE1O95461 756 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 ICAM1P05362 532 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 CTGFP29279 349 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 STAT3P40763 770 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 CCT2P78371 535 aaKnown RBP14.92□□□□□ -0.02
TCOF1-210ENST00000506767 CCNA1P78396 465 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 LACTBP83111 547 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-210ENST00000506767 CAP1Q01518 475 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 NTRK3Q16288 839 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 ME3Q16798 604 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 RIOX2Q8IUF8 465 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 CMTR1Q8N1G2 835 aaKnown RBP14.92□□□□□ -0.02
TCOF1-210ENST00000506767 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 TEX13BQ9BXU2 312 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 RAVER2Q9HCJ3 691 aaKnown RBP14.92□□□□□ -0.02
TCOF1-210ENST00000506767 VAT1LQ9HCJ6 419 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 LIMCH1Q9UPQ0 1083 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 MGAMO43451 1857 aa14.92□□□□□ -0.02
TCOF1-210ENST00000506767 ST18O60284 1047 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CD2BP2O95400 341 aaKnown RBP14.91□□□□□ -0.02
TCOF1-210ENST00000506767 SLC25A27O95847 323 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 SCRN1Q12765 414 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 PLS1Q14651 629 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CDC37Q16543 378 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-210ENST00000506767 QRICH1Q2TAL8 776 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CCDC174Q6PII3 467 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CPXCR1Q8N123 301 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 ABHD8Q96I13 439 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 AGBL1Q96MI9 1066 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 PIGSQ96S52 555 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 PORCNQ9H237 461 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 NCOA5Q9HCD5 579 aaKnown RBP14.91□□□□□ -0.02
TCOF1-210ENST00000506767 RIPK3Q9Y572 518 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CTDP1Q9Y5B0 961 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-210ENST00000506767 ZSWIM8A7E2V4 1837 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CASP8AP2Q9UKL3 1982 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CNTNAP5Q8WYK1 1306 aa14.91□□□□□ -0.02
TCOF1-210ENST00000506767 CCDC85CA6NKD9 419 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 ZBTB5O15062 677 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 DHX16O60231 1041 aaKnown RBP14.9□□□□□ -0.02
TCOF1-210ENST00000506767 IFNAR1P17181 557 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 ERCC3P19447 782 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 MAPK4P31152 587 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 COPB2P35606 906 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 STK3Q13188 491 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 SNRNP48Q6IEG0 339 aaKnown RBP14.9□□□□□ -0.02
TCOF1-210ENST00000506767 NOL8Q76FK4 1167 aaKnown RBP14.9□□□□□ -0.02
TCOF1-210ENST00000506767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.9□□□□□ -0.02
TCOF1-210ENST00000506767 CD99L2Q8TCZ2 262 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 ERO1AQ96HE7 468 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 ZSCAN31Q96LW9 406 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-210ENST00000506767 ARHGAP39Q9C0H5 1083 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 SLKQ9H2G2 1235 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-210ENST00000506767 MROH8Q9H579 483 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 EFCC1Q9HA90 598 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 PNMA2Q9UL42 364 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 MYH6P13533 1939 aa14.9□□□□□ -0.02
TCOF1-210ENST00000506767 SMCHD1A6NHR9 2005 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 PPP1R11O60927 126 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-210ENST00000506767 PSMC4P43686 418 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 TKFCQ3LXA3 575 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 CCDC82Q8N4S0 544 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 GTF3C6Q969F1 213 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 RRP36Q96EU6 259 aaKnown RBP14.89□□□□□ -0.03
TCOF1-210ENST00000506767 TRIM47Q96LD4 638 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 CCPG1Q9ULG6 757 aa14.89□□□□□ -0.03
TCOF1-210ENST00000506767 BAZ2BQ9UIF8 2168 aaKnown RBP14.88□□□□□ -0.03
TCOF1-210ENST00000506767 PRPF3O43395 683 aaKnown RBP14.88□□□□□ -0.03
TCOF1-210ENST00000506767 MCM2P49736 904 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 FCGRTP55899 365 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 ST3GAL1Q11201 340 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 KIF22Q14807 665 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 GPR142Q7Z601 462 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 NCAPG2Q86XI2 1143 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 FBXO11Q86XK2 927 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 HOMER1Q86YM7 354 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 NECAB1Q8N987 351 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 CHST13Q8NET6 341 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 AMNQ9BXJ7 453 aa14.88□□□□□ -0.03
TCOF1-210ENST00000506767 SH2B1Q9NRF2 756 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-210ENST00000506767 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 STRNO43815 780 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 CTDNEP1O95476 244 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 GNRH1P01148 92 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 ALAS1P13196 640 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 TAL1P17542 331 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-210ENST00000506767 PLEKHH3Q7Z736 793 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 TRERF1Q96PN7 1200 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 RNF26Q9BY78 433 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-210ENST00000506767 FBXO40Q9UH90 709 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 GJD2Q9UKL4 321 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 V9GY48 417 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-210ENST00000506767 ABCB11O95342 1321 aa14.87□□□□□ -0.03
TCOF1-210ENST00000506767 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 TNPO2O14787 897 aaKnown RBP14.86□□□□□ -0.03
TCOF1-210ENST00000506767 CPLX1O14810 134 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 FMNL1O95466 1100 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-210ENST00000506767 PTPREP23469 700 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms