RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 PLS1Q14651 629 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 SLC9C1Q4G0N8 1177 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 RCSD1Q6JBY9 416 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 LBX2Q6XYB7 198 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 RAET1EQ8TD07 263 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 PTPDC1A2A3K4 754 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.17
SERF1B-204ENST00000506542 SNAP25P60880 206 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 TMEM132BQ14DG7 1078 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 SYNE3Q6ZMZ3 975 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 MICU3Q86XE3 530 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 TMEM47Q9BQJ4 181 aa16.11■□□□□ 0.17
SERF1B-204ENST00000506542 TAL1P17542 331 aaPredicted RBP16.1■□□□□ 0.17
SERF1B-204ENST00000506542 MTFR1Q15390 333 aa16.1■□□□□ 0.17
SERF1B-204ENST00000506542 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
SERF1B-204ENST00000506542 KIFC2Q96AC6 838 aa16.1■□□□□ 0.17
SERF1B-204ENST00000506542 MOV10L1Q9BXT6 1211 aaKnown RBP16.1■□□□□ 0.17
SERF1B-204ENST00000506542 GJD2Q9UKL4 321 aa16.1■□□□□ 0.17
SERF1B-204ENST00000506542 MYH15Q9Y2K3 1946 aa16.1■□□□□ 0.17
SERF1B-204ENST00000506542 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
SERF1B-204ENST00000506542 ZSCAN22P10073 491 aaPredicted RBP16.09■□□□□ 0.17
SERF1B-204ENST00000506542 MCM4P33991 863 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 TRIM32Q13049 653 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 ARHGEF6Q15052 776 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
SERF1B-204ENST00000506542 LARP1BQ659C4 914 aaKnown RBP16.09■□□□□ 0.17
SERF1B-204ENST00000506542 ZNF654Q8IZM8 581 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 GMCL1P1Q8NEA9 526 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 COA7Q96BR5 231 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 DDX11Q96FC9 970 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 HOXC10Q9NYD6 342 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
SERF1B-204ENST00000506542 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
SERF1B-204ENST00000506542 POTEFA5A3E0 1075 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 GOLGA8AA7E2F4 631 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 TMEM232C9JQI7 657 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 VWA5AO00534 786 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 CPLX1O14810 134 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 BAG4O95429 457 aaKnown RBP16.08■□□□□ 0.17
SERF1B-204ENST00000506542 RXRAP19793 462 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 CYP2B6P20813 491 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 NOVP48745 357 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 SLF1Q9BQI6 1058 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 TCP11L1Q9NUJ3 509 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 MTMR6Q9Y217 621 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 KIF3AQ9Y496 699 aa16.08■□□□□ 0.17
SERF1B-204ENST00000506542 DNAH12Q6ZR08 3092 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 ADCY3O60266 1144 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 GNRH1P01148 92 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 BMP3P12645 472 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 ERCC3P19447 782 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 HOXD10P28358 340 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 CDC27P30260 824 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 GRK4P32298 578 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 SLC1A4P43007 532 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 CCL14Q16627 93 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
SERF1B-204ENST00000506542 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
SERF1B-204ENST00000506542 FAM184AQ8NB25 1140 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 REPS2Q8NFH8 660 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
SERF1B-204ENST00000506542 ZNF333Q96JL9 665 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 ANP32EQ9BTT0 268 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 CPVLQ9H3G5 476 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 FAM217BQ9NTX9 383 aaPredicted RBP16.08■□□□□ 0.16
SERF1B-204ENST00000506542 ADAMTS5Q9UNA0 930 aa16.08■□□□□ 0.16
SERF1B-204ENST00000506542 CDKL5O76039 1030 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
SERF1B-204ENST00000506542 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
SERF1B-204ENST00000506542 SLC16A2P36021 539 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 PLEKHH3Q7Z736 793 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 DGKHQ86XP1 1220 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 HOMEZQ8IX15 550 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 CPXCR1Q8N123 301 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 ANKS1AQ92625 1134 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 ARMC5Q96C12 935 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
SERF1B-204ENST00000506542 RIPK3Q9Y572 518 aa16.07■□□□□ 0.16
SERF1B-204ENST00000506542 VPS37CA5D8V6 355 aaPredicted RBP16.06■□□□□ 0.16
SERF1B-204ENST00000506542 DDAH1O94760 285 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 F13A1P00488 732 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 GOLGA8HP0CJ92 632 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 MAPK4P31152 587 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 NTRK3Q16288 839 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 RTN1Q16799 776 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
SERF1B-204ENST00000506542 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms