RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 OGDHLQ9ULD0 1010 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 SNHG28P0DPA3 235 aa18.23■□□□□ 0.51
MED28-204ENST00000506409 LHX8Q68G74 356 aa18.23■□□□□ 0.51
MED28-204ENST00000506409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.23■□□□□ 0.51
MED28-204ENST00000506409 ANKS1AQ92625 1134 aa18.23■□□□□ 0.51
MED28-204ENST00000506409 PAWRQ96IZ0 340 aaKnown RBP18.23■□□□□ 0.51
MED28-204ENST00000506409 HTATIP2Q9BUP3 242 aa18.23■□□□□ 0.51
MED28-204ENST00000506409 ACAD9Q9H845 621 aa18.23■□□□□ 0.51
MED28-204ENST00000506409 DDX20Q9UHI6 824 aaKnown RBP18.23■□□□□ 0.51
MED28-204ENST00000506409 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
MED28-204ENST00000506409 DNAJC25-GNG10A0A024R161 153 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 MSCO60682 206 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 ALAS1P13196 640 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 TKFCQ3LXA3 575 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 GPATCH4Q5T3I0 446 aaKnown RBP18.22■□□□□ 0.51
MED28-204ENST00000506409 NECAB2Q7Z6G3 386 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 RALYLQ86SE5 291 aaKnown RBP18.22■□□□□ 0.51
MED28-204ENST00000506409 TRPV1Q8NER1 839 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 DIS3LQ8TF46 1054 aaKnown RBP18.22■□□□□ 0.51
MED28-204ENST00000506409 TINF2Q9BSI4 451 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 RANBP17Q9H2T7 1088 aaKnown RBP18.22■□□□□ 0.51
MED28-204ENST00000506409 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 CCPG1Q9ULG6 757 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 PLXNA1Q9UIW2 1896 aa18.22■□□□□ 0.51
MED28-204ENST00000506409 E7EWF7 191 aa18.21■□□□□ 0.51
MED28-204ENST00000506409 ICAM1P05362 532 aa18.21■□□□□ 0.51
MED28-204ENST00000506409 GOLGA8HP0CJ92 632 aa18.21■□□□□ 0.51
MED28-204ENST00000506409 IFIT1BQ5T764 474 aaKnown RBP18.21■□□□□ 0.51
MED28-204ENST00000506409 CYB5R4Q7L1T6 521 aa18.21■□□□□ 0.51
MED28-204ENST00000506409 NCOA7Q8NI08 942 aa18.21■□□□□ 0.51
MED28-204ENST00000506409 TRERF1Q96PN7 1200 aa18.21■□□□□ 0.51
MED28-204ENST00000506409 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
MED28-204ENST00000506409 PRAMEF19Q5SWL8 479 aa18.2■□□□□ 0.5
MED28-204ENST00000506409 CASC1Q6TDU7 716 aa18.2■□□□□ 0.5
MED28-204ENST00000506409 DPF3Q92784 378 aa18.2■□□□□ 0.5
MED28-204ENST00000506409 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
MED28-204ENST00000506409 NRBP1Q9UHY1 535 aa18.2■□□□□ 0.5
MED28-204ENST00000506409 SEPT4O43236 478 aa18.19■□□□□ 0.5
MED28-204ENST00000506409 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
MED28-204ENST00000506409 MNX1P50219 401 aaPredicted RBP18.19■□□□□ 0.5
MED28-204ENST00000506409 SEC23AQ15436 765 aa18.19■□□□□ 0.5
MED28-204ENST00000506409 STOX1Q6ZVD7 989 aa18.19■□□□□ 0.5
MED28-204ENST00000506409 MSL3Q8N5Y2 521 aaKnown RBP18.19■□□□□ 0.5
MED28-204ENST00000506409 A1CFQ9NQ94 594 aaKnown RBP18.19■□□□□ 0.5
MED28-204ENST00000506409 ERICH2A1L162 156 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 POTEB2H3BUK9 544 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 CDC45O75419 566 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 TAL1P17542 331 aaPredicted RBP18.18■□□□□ 0.5
MED28-204ENST00000506409 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
MED28-204ENST00000506409 ASPRV1Q53RT3 343 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 MUM1L1Q5H9M0 696 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 ZNF467Q7Z7K2 595 aaPredicted RBP18.18■□□□□ 0.5
MED28-204ENST00000506409 C11orf49Q9H6J7 331 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 PNMA2Q9UL42 364 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 CNPY2Q9Y2B0 182 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 FRMPD3Q5JV73 1810 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 PFASO15067 1338 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 SYNGAP1Q96PV0 1343 aa18.18■□□□□ 0.5
MED28-204ENST00000506409 IFIT3O14879 490 aaKnown RBP18.17■□□□□ 0.5
MED28-204ENST00000506409 PARP1P09874 1014 aaKnown RBP18.17■□□□□ 0.5
MED28-204ENST00000506409 ANO1Q5XXA6 986 aa18.17■□□□□ 0.5
MED28-204ENST00000506409 MAMDC4Q6UXC1 1216 aa18.17■□□□□ 0.5
MED28-204ENST00000506409 UBA5Q9GZZ9 404 aa18.17■□□□□ 0.5
MED28-204ENST00000506409 CPVLQ9H3G5 476 aa18.17■□□□□ 0.5
MED28-204ENST00000506409 CNTN2Q02246 1040 aa18.16■□□□□ 0.5
MED28-204ENST00000506409 NSMFQ6X4W1 530 aa18.16■□□□□ 0.5
MED28-204ENST00000506409 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
MED28-204ENST00000506409 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
MED28-204ENST00000506409 FAM133AQ8N9E0 248 aa18.16■□□□□ 0.5
MED28-204ENST00000506409 FGD4Q96M96 766 aa18.16■□□□□ 0.5
MED28-204ENST00000506409 CYP39A1Q9NYL5 469 aa18.16■□□□□ 0.5
MED28-204ENST00000506409 WDR19Q8NEZ3 1342 aa18.16■□□□□ 0.5
MED28-204ENST00000506409 SLC27A2O14975 620 aa18.15■□□□□ 0.5
MED28-204ENST00000506409 SNAI1O95863 264 aaPredicted RBP18.15■□□□□ 0.5
MED28-204ENST00000506409 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
MED28-204ENST00000506409 WTAPQ15007 396 aa18.15■□□□□ 0.5
MED28-204ENST00000506409 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
MED28-204ENST00000506409 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
MED28-204ENST00000506409 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.15■□□□□ 0.5
MED28-204ENST00000506409 ZHX1Q9UKY1 873 aaPredicted RBP18.15■□□□□ 0.5
MED28-204ENST00000506409 H0YGN5 161 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 DNM1LO00429 736 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 NFIBO00712 420 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 DHX16O60231 1041 aaKnown RBP18.14■□□□□ 0.49
MED28-204ENST00000506409 EVI5O60447 810 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 RARBP10826 455 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 COL6A1P12109 1028 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 AKR1A1P14550 325 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 ANTXR2P58335 489 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.49
MED28-204ENST00000506409 TMEM67Q5HYA8 995 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 ARMCX2Q7L311 632 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 CCDC144CPQ8IYA2 1237 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 ADGRF4Q8IZF3 695 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 ARRDC4Q8NCT1 418 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 NR2E3Q9Y5X4 410 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 SMCHD1A6NHR9 2005 aa18.14■□□□□ 0.49
MED28-204ENST00000506409 SOWAHBA6NEL2 793 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms