RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 ELF2Q15723 593 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 CLUL1Q15846 466 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 SLC14A2Q15849 920 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 SLFNL1Q499Z3 407 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 BTNL9Q6UXG8 535 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 ANGPTL8Q6UXH0 198 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 GALNT5Q7Z7M9 940 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 CCDC13Q8IYE1 715 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 C7orf31Q8N865 590 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 LSMEM1Q8N8F7 131 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 ANKK1Q8NFD2 765 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 SNX21Q969T3 373 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 C1orf74Q96LT6 269 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
HTT-203ENST00000506137 SARGQ9BW04 601 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 CDH19Q9H159 772 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 STARD7Q9NQZ5 370 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 PAPOLBQ9NRJ5 636 aaKnown RBP9.98□□□□□ -0.81
HTT-203ENST00000506137 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.98□□□□□ -0.81
HTT-203ENST00000506137 PLAAQ9Y263 795 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 PCDHGB3Q9Y5G1 929 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 USP19O94966 1318 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 UBR1Q8IWV7 1749 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
HTT-203ENST00000506137 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 MARF1Q9Y4F3 1742 aaKnown RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 FSD2A1L4K1 749 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 NDC80O14777 642 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 NBNO60934 754 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 APBB3O95704 486 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 AGR2O95994 175 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 CYP17A1P05093 508 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 LDHBP07195 334 aaKnown RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 USP17L8P0C7I0 530 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 SKIP12755 728 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 LTKP29376 864 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 WEE1P30291 646 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 ASMTP46597 345 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 NEK2P51955 445 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 NEK3P51956 506 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 INAQ16352 499 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 GPR162Q16538 588 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 GNPTABQ3T906 1256 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 GALNT17Q6IS24 598 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 FAM196AQ6ZSG2 479 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 ARHGEF18Q6ZSZ5 1173 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 ARMC9Q7Z3E5 817 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 MILR1Q7Z6M3 343 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 DDX42Q86XP3 938 aaKnown RBP eCLIP9.97□□□□□ -0.81
HTT-203ENST00000506137 LRRC43Q8N309 656 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 CARNMT1Q8N4J0 409 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 CCDC26Q8TAB7 109 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 TMC1Q8TDI8 760 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 TNPO1Q92973 898 aaKnown RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 CNDP2Q96KP4 475 aaKnown RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 TSGA13Q96PP4 275 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 LSM14BQ9BX40 385 aaKnown RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 PRDM11Q9NQV5 511 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 FAM217BQ9NTX9 383 aaPredicted RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 SEPT11Q9NVA2 429 aaKnown RBP9.97□□□□□ -0.81
HTT-203ENST00000506137 CHMP5Q9NZZ3 219 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 NCOA3Q9Y6Q9 1424 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 SLIT1O75093 1534 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 SAMD9LQ8IVG5 1584 aa9.97□□□□□ -0.81
HTT-203ENST00000506137 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 RASA4O43374 803 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 TSC22D2O75157 780 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 FGFR1OPO95684 399 aaKnown RBP9.96□□□□□ -0.82
HTT-203ENST00000506137 HOXD12P35452 270 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 EPS15P42566 896 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 DGKGP49619 791 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 FMR1Q06787 632 aaKnown RBP eCLIP9.96□□□□□ -0.82
HTT-203ENST00000506137 ESCO1Q5FWF5 840 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 HHATQ5VTY9 493 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 GBP6Q6ZN66 633 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 EEPD1Q7L9B9 569 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 PODNQ7Z5L7 613 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 C7orf61Q8IZ16 206 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 TNIP2Q8NFZ5 429 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 TRIM58Q8NG06 486 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 OR52K2Q8NGK3 314 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 GAS2L2Q8NHY3 880 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 FAM161BQ96MY7 647 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 BRD9Q9H8M2 597 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 UPF2Q9HAU5 1272 aaKnown RBP9.96□□□□□ -0.82
HTT-203ENST00000506137 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.82
HTT-203ENST00000506137 ZCCHC17Q9NP64 241 aaKnown RBP9.96□□□□□ -0.82
HTT-203ENST00000506137 KDRP35968 1356 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 ASXL1Q8IXJ9 1541 aa9.96□□□□□ -0.82
HTT-203ENST00000506137 RASA4BC9J798 803 aa9.95□□□□□ -0.82
HTT-203ENST00000506137 KLHL41O60662 606 aa9.95□□□□□ -0.82
HTT-203ENST00000506137 ADAMTS4O75173 837 aa9.95□□□□□ -0.82
HTT-203ENST00000506137 INMTO95050 263 aa9.95□□□□□ -0.82
HTT-203ENST00000506137 SSBP05455 408 aaKnown RBP eCLIP9.95□□□□□ -0.82
HTT-203ENST00000506137 S100A6P06703 90 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms