RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 REPS2Q8NFH8 660 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 CHMP4BQ9H444 224 aaKnown RBP9.84□□□□□ -0.83
SNF8-204ENST00000506104 MSRAQ9UJ68 235 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 ADAMTS5Q9UNA0 930 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 SYNGAP1Q96PV0 1343 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 ZBBXA8MT70 800 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 TMEM232C9JQI7 657 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 TSPY3P0CV98 308 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 TSPY8P0CW00 308 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 ALAS1P13196 640 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 CHMP4BP1P59074 171 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 CNTN2Q02246 1040 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 TNFAIP2Q03169 654 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 MFSD5Q6N075 450 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 ZNF365Q70YC5 407 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 CCDC144CPQ8IYA2 1237 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 STRBPQ96SI9 672 aaKnown RBP9.83□□□□□ -0.84
SNF8-204ENST00000506104 AP5M1Q9H0R1 490 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 NKX2-4Q9H2Z4 354 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 ABHD16BQ9H3Z7 469 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 ZNF287Q9HBT7 754 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 ECHDC1Q9NTX5 307 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 NYAP2Q9P242 653 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 FBXO40Q9UH90 709 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 FEM1BQ9UK73 627 aa9.83□□□□□ -0.84
SNF8-204ENST00000506104 GREB1LQ9C091 1923 aaPredicted RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 TMEM265A0A087WTH1 108 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 GSG1L2A8MUP6 293 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 ARVCFO00192 962 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 RNF113AO15541 343 aaKnown RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 DYNC1LI2O43237 492 aaPredicted RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 SLC3A2P08195 630 aaKnown RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 BMP3P12645 472 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 CCL23P55773 120 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 SKIV2LQ15477 1246 aaKnown RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 TJAP1Q5JTD0 557 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 TMEM240Q5SV17 173 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 CXCL17Q6UXB2 119 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 NSMFQ6X4W1 530 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 ANKRD33Q7Z3H0 272 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 MSL3Q8N5Y2 521 aaKnown RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 KLHDC9Q8NEP7 349 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 CEP95Q96GE4 821 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 TOX2Q96NM4 488 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNF8-204ENST00000506104 PBX4Q9BYU1 374 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 NACAP1Q9BZK3 213 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 MTIF3Q9H2K0 278 aaKnown RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 ACAD9Q9H845 621 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 TOMM22Q9NS69 142 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 RNF146Q9NTX7 359 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 ZBTB40Q9NUA8 1239 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 DDX49Q9Y6V7 483 aaKnown RBP9.82□□□□□ -0.84
SNF8-204ENST00000506104 DNAH12Q6ZR08 3092 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 ELP1O95163 1332 aa9.82□□□□□ -0.84
SNF8-204ENST00000506104 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.81□□□□□ -0.84
SNF8-204ENST00000506104 M0R2C6 588 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 TNFRSF10AO00220 468 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 GPAA1O43292 621 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 ADCY6O43306 1168 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 ZEB2O60315 1214 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 TTLL1O95922 423 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 FGBP02675 491 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 PTGS1P23219 599 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 MCCP23508 829 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 SLC1A4P43007 532 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 TFAP4Q01664 338 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 C1QBPQ07021 282 aaKnown RBP9.81□□□□□ -0.84
SNF8-204ENST00000506104 PDE4BQ07343 736 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 CCDC96Q2M329 555 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 SBK1Q52WX2 424 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 PSRC1Q6PGN9 363 aaPredicted RBP9.81□□□□□ -0.84
SNF8-204ENST00000506104 OTOP2Q7RTS6 562 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 CHST13Q8NET6 341 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 APPBP2Q92624 585 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 OSBP2Q969R2 916 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 AGBL1Q96MI9 1066 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 FSD1Q9BTV5 496 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 NAPBQ9H115 298 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 HIPK3Q9H422 1215 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 SLC28A3Q9HAS3 691 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 SLC38A10Q9HBR0 1119 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 TBX21Q9UL17 535 aa9.81□□□□□ -0.84
SNF8-204ENST00000506104 ROBO3Q96MS0 1386 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 DNAJC25-GNG10A0A024R161 153 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 GNAT2P19087 354 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 STAT2P52630 851 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 RABGGTBP53611 331 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 GJA9P57773 515 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 PSMC6P62333 389 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 ITGA7Q13683 1181 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 RAB30Q15771 203 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 FSCN1Q16658 493 aaKnown RBP9.8□□□□□ -0.84
SNF8-204ENST00000506104 FAM47CQ5HY64 1035 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 MAMDC4Q6UXC1 1216 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 KCTD1Q719H9 257 aa9.8□□□□□ -0.84
SNF8-204ENST00000506104 C16orf59Q7L2K0 433 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms