RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 UPF3AQ9H1J1 476 aaKnown RBP12.41□□□□□ -0.42
BRIX1-202ENST00000506023 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
BRIX1-202ENST00000506023 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.41□□□□□ -0.42
BRIX1-202ENST00000506023 CXXC1Q9P0U4 656 aaPredicted RBP12.41□□□□□ -0.42
BRIX1-202ENST00000506023 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
BRIX1-202ENST00000506023 ZNF536O15090 1300 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 TANC1Q9C0D5 1861 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.4□□□□□ -0.42
BRIX1-202ENST00000506023 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.4□□□□□ -0.42
BRIX1-202ENST00000506023 M0R2C6 588 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 ATP2A1O14983 1001 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 DUSP11O75319 330 aaKnown RBP12.4□□□□□ -0.42
BRIX1-202ENST00000506023 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 BEX3Q00994 111 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 MFSD5Q6N075 450 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 ARMCX2Q7L311 632 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
BRIX1-202ENST00000506023 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 PRDM12Q9H4Q4 367 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 NYAP2Q9P242 653 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 FAM184BQ9ULE4 1060 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
BRIX1-202ENST00000506023 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 MOXD2PA6NHM9 499 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 CD4P01730 458 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 C6orf222P0C671 652 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-202ENST00000506023 CYP2C18P33260 490 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 GJA9P57773 515 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 CHMP4CQ96CF2 233 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 TIFAQ96CG3 184 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 CEP95Q96GE4 821 aa12.39□□□□□ -0.43
BRIX1-202ENST00000506023 PURBQ96QR8 312 aaKnown RBP12.39□□□□□ -0.43
BRIX1-202ENST00000506023 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
BRIX1-202ENST00000506023 ARPP21Q9UBL0 812 aaPredicted RBP12.39□□□□□ -0.43
BRIX1-202ENST00000506023 YBX2Q9Y2T7 364 aaKnown RBP12.39□□□□□ -0.43
BRIX1-202ENST00000506023 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
BRIX1-202ENST00000506023 COL4A4P53420 1690 aaPredicted RBP12.38□□□□□ -0.43
BRIX1-202ENST00000506023 ELP1O95163 1332 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
BRIX1-202ENST00000506023 SCN10AQ9Y5Y9 1956 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 DCDC2CA8MYV0 355 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 MINDY4BA8MYZ0 360 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 ARVCFO00192 962 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 FOXP2O15409 715 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 NKX3-2P78367 333 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
BRIX1-202ENST00000506023 MSL3Q8N5Y2 521 aaKnown RBP12.38□□□□□ -0.43
BRIX1-202ENST00000506023 FAM133AQ8N9E0 248 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 PPM1EQ8WY54 764 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.43
BRIX1-202ENST00000506023 CLIP2Q9UDT6 1046 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 PLIN4Q96Q06 1357 aa12.38□□□□□ -0.43
BRIX1-202ENST00000506023 COPB2P35606 906 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
BRIX1-202ENST00000506023 SNAP25P60880 206 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 TJAP1Q5JTD0 557 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
BRIX1-202ENST00000506023 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 NUP133Q8WUM0 1156 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 MKL1Q969V6 931 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 WNT8AQ9H1J5 351 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 A1CFQ9NQ94 594 aaKnown RBP12.37□□□□□ -0.43
BRIX1-202ENST00000506023 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 PDGFCQ9NRA1 345 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 MTMR4Q9NYA4 1195 aa12.37□□□□□ -0.43
BRIX1-202ENST00000506023 GNEQ9Y223 722 aaKnown RBP12.37□□□□□ -0.43
BRIX1-202ENST00000506023 GPAA1O43292 621 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 MYOGP15173 224 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 CXCL17Q6UXB2 119 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 KBTBD3Q8NAB2 608 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 ABHD16BQ9H3Z7 469 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
BRIX1-202ENST00000506023 A0A0U1RQG5 324 aaPredicted RBP12.35□□□□□ -0.43
BRIX1-202ENST00000506023 HMMRO75330 724 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 SMPD1P17405 629 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 RABGGTBP53611 331 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 PSMC6P62333 389 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
BRIX1-202ENST00000506023 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
BRIX1-202ENST00000506023 MUM1L1Q5H9M0 696 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 TAPT1Q6NXT6 567 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 AMOTL1Q8IY63 956 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 ANKRD35Q8N283 1001 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 GMCL1P1Q8NEA9 526 aa12.35□□□□□ -0.43
BRIX1-202ENST00000506023 OTUD7AQ8TE49 926 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms