RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 SLC16A2P36021 539 aa13.37□□□□□ -0.27
KDM3B-203ENST00000505756 SLC4A3P48751 1232 aa13.37□□□□□ -0.27
KDM3B-203ENST00000505756 TKFCQ3LXA3 575 aa13.37□□□□□ -0.27
KDM3B-203ENST00000505756 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
KDM3B-203ENST00000505756 TTBK2Q6IQ55 1244 aa13.37□□□□□ -0.27
KDM3B-203ENST00000505756 CYB5R4Q7L1T6 521 aa13.37□□□□□ -0.27
KDM3B-203ENST00000505756 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
KDM3B-203ENST00000505756 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
KDM3B-203ENST00000505756 CCND3P30281 292 aaPredicted RBP13.36□□□□□ -0.27
KDM3B-203ENST00000505756 SEC23AQ15436 765 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 ZNF792Q3KQV3 632 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
KDM3B-203ENST00000505756 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 STOX1Q6ZVD7 989 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 ANKRD35Q8N283 1001 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 ANKLE1Q8NAG6 615 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 DDX11Q96FC9 970 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 PNMA2Q9UL42 364 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 TAF6LQ9Y6J9 622 aa13.36□□□□□ -0.27
KDM3B-203ENST00000505756 DNAJC25-GNG10A0A024R161 153 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 ERICH2A1L162 156 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 MSCO60682 206 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 FARP2O94887 1054 aaPredicted RBP13.35□□□□□ -0.27
KDM3B-203ENST00000505756 ICAM1P05362 532 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 CYBAP13498 195 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 SNAP25P60880 206 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
KDM3B-203ENST00000505756 ASPRV1Q53RT3 343 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
KDM3B-203ENST00000505756 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 RNF146Q9NTX7 359 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 CCPG1Q9ULG6 757 aa13.35□□□□□ -0.27
KDM3B-203ENST00000505756 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
KDM3B-203ENST00000505756 SLC27A2O14975 620 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 GOLGA8HP0CJ92 632 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 ALAS1P13196 640 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 LHX8Q68G74 356 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
KDM3B-203ENST00000505756 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
KDM3B-203ENST00000505756 TRPV1Q8NER1 839 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 TRERF1Q96PN7 1200 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 TINF2Q9BSI4 451 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 DDX20Q9UHI6 824 aaKnown RBP13.34□□□□□ -0.27
KDM3B-203ENST00000505756 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
KDM3B-203ENST00000505756 REC8O95072 547 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
KDM3B-203ENST00000505756 CNGA1P29973 690 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 WTAPQ15007 396 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 RNF20Q5VTR2 975 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 MTA3Q9BTC8 594 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
KDM3B-203ENST00000505756 PFASO15067 1338 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 SYNGAP1Q96PV0 1343 aa13.33□□□□□ -0.28
KDM3B-203ENST00000505756 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
KDM3B-203ENST00000505756 PLXNA1Q9UIW2 1896 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 SEPT4O43236 478 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 SEC24BO95487 1268 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 ANTXR2P58335 489 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 TMEM67Q5HYA8 995 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 CHST3Q7LGC8 479 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 NECAB2Q7Z6G3 386 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 IL17RAQ96F46 866 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 HTATIP2Q9BUP3 242 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
KDM3B-203ENST00000505756 POTEB2H3BUK9 544 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 MCM5P33992 734 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
KDM3B-203ENST00000505756 MUM1L1Q5H9M0 696 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 PRAMEF19Q5SWL8 479 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
KDM3B-203ENST00000505756 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 IGDCC4Q8TDY8 1250 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 PAWRQ96IZ0 340 aaKnown RBP13.31□□□□□ -0.28
KDM3B-203ENST00000505756 TBC1D32Q96NH3 1257 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 CPVLQ9H3G5 476 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
KDM3B-203ENST00000505756 PALM3A6NDB9 673 aaPredicted RBP13.3□□□□□ -0.28
KDM3B-203ENST00000505756 KLRF2D3W0D1 207 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 PRC1O43663 620 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
KDM3B-203ENST00000505756 CNTN2Q02246 1040 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 GRM4Q14833 912 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
KDM3B-203ENST00000505756 NSMFQ6X4W1 530 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 CATIPQ7Z7H3 387 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 DIS3LQ8TF46 1054 aaKnown RBP13.3□□□□□ -0.28
KDM3B-203ENST00000505756 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 FGD4Q96M96 766 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms