RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 MAMDC4Q6UXC1 1216 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 RASGRP2Q7LDG7 609 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 RNF180Q86T96 592 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 AMOTL1Q8IY63 956 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 LRRC47Q8N1G4 583 aaKnown RBP7.01□□□□□ -1.29
GYPB-205ENST00000505583 KBTBD3Q8NAB2 608 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 KLHDC9Q8NEP7 349 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 FBXO22Q8NEZ5 403 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 OTUD7AQ8TE49 926 aaPredicted RBP7.01□□□□□ -1.29
GYPB-205ENST00000505583 CHMP4CQ96CF2 233 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 CEP95Q96GE4 821 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 SEC62Q99442 399 aaKnown RBP7.01□□□□□ -1.29
GYPB-205ENST00000505583 TEX13BQ9BXU2 312 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 RAVER2Q9HCJ3 691 aaKnown RBP7.01□□□□□ -1.29
GYPB-205ENST00000505583 ECHDC1Q9NTX5 307 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 NYAP2Q9P242 653 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 ARPP21Q9UBL0 812 aaPredicted RBP7.01□□□□□ -1.29
GYPB-205ENST00000505583 CLIP2Q9UDT6 1046 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 NRBP1Q9UHY1 535 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 RCAN3Q9UKA8 241 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 TACC3Q9Y6A5 838 aa7.01□□□□□ -1.29
GYPB-205ENST00000505583 VCANP13611 3396 aa7□□□□□ -1.29
GYPB-205ENST00000505583 ATP2A1O14983 1001 aa7□□□□□ -1.29
GYPB-205ENST00000505583 CTAGE5O15320 804 aa7□□□□□ -1.29
GYPB-205ENST00000505583 RNF113AO15541 343 aaKnown RBP7□□□□□ -1.29
GYPB-205ENST00000505583 GPAA1O43292 621 aa7□□□□□ -1.29
GYPB-205ENST00000505583 RAG1P15918 1043 aa7□□□□□ -1.29
GYPB-205ENST00000505583 SMAD3P84022 425 aaKnown RBP7□□□□□ -1.29
GYPB-205ENST00000505583 KCNA10Q16322 511 aa7□□□□□ -1.29
GYPB-205ENST00000505583 TMEM63BQ5T3F8 832 aa7□□□□□ -1.29
GYPB-205ENST00000505583 ZSCAN25Q6NSZ9 544 aa7□□□□□ -1.29
GYPB-205ENST00000505583 C16orf59Q7L2K0 433 aa7□□□□□ -1.29
GYPB-205ENST00000505583 ANKRD33Q7Z3H0 272 aa7□□□□□ -1.29
GYPB-205ENST00000505583 PRPF38AQ8NAV1 312 aaKnown RBP7□□□□□ -1.29
GYPB-205ENST00000505583 USP38Q8NB14 1042 aa7□□□□□ -1.29
GYPB-205ENST00000505583 MAFAQ8NHW3 353 aaPredicted RBP7□□□□□ -1.29
GYPB-205ENST00000505583 APPBP2Q92624 585 aa7□□□□□ -1.29
GYPB-205ENST00000505583 KIFC2Q96AC6 838 aa7□□□□□ -1.29
GYPB-205ENST00000505583 DDX11Q96FC9 970 aa7□□□□□ -1.29
GYPB-205ENST00000505583 DDRGK1Q96HY6 314 aa7□□□□□ -1.29
GYPB-205ENST00000505583 RNPC3Q96LT9 517 aaKnown RBP7□□□□□ -1.29
GYPB-205ENST00000505583 KATNBL1Q9H079 304 aa7□□□□□ -1.29
GYPB-205ENST00000505583 MKNK2Q9HBH9 465 aa7□□□□□ -1.29
GYPB-205ENST00000505583 SLC38A10Q9HBR0 1119 aa7□□□□□ -1.29
GYPB-205ENST00000505583 INCENPQ9NQS7 918 aa7□□□□□ -1.29
GYPB-205ENST00000505583 TMEM39AQ9NV64 488 aa7□□□□□ -1.29
GYPB-205ENST00000505583 ZHX1Q9UKY1 873 aaPredicted RBP7□□□□□ -1.29
GYPB-205ENST00000505583 TBX21Q9UL17 535 aa7□□□□□ -1.29
GYPB-205ENST00000505583 CNPY2Q9Y2B0 182 aa7□□□□□ -1.29
GYPB-205ENST00000505583 ASTN1O14525 1302 aa7□□□□□ -1.29
GYPB-205ENST00000505583 SYNGAP1Q96PV0 1343 aa7□□□□□ -1.29
GYPB-205ENST00000505583 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.99□□□□□ -1.29
GYPB-205ENST00000505583 SOWAHBA6NEL2 793 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 GRXCR1A8MXD5 290 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 FOXP2O15409 715 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 DUSP11O75319 330 aaKnown RBP6.99□□□□□ -1.29
GYPB-205ENST00000505583 ASGR1P07306 291 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 PBX2P40425 430 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 CDK7P50613 346 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 SNAP25P60880 206 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 CNTN2Q02246 1040 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 FPGSQ05932 587 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 ACVR2BQ13705 512 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 GRIN2CQ14957 1233 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 CCDC144BQ3MJ40 725 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 GIMAP6Q6P9H5 292 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 CCDC144CPQ8IYA2 1237 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 IFNL3Q8IZI9 196 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 MKL1Q969V6 931 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.99□□□□□ -1.29
GYPB-205ENST00000505583 TSEN34Q9BSV6 310 aaKnown RBP6.99□□□□□ -1.29
GYPB-205ENST00000505583 DCTPP1Q9H773 170 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 STARD7Q9NQZ5 370 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 HOMER2Q9NSB8 354 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.99□□□□□ -1.29
GYPB-205ENST00000505583 MTMR4Q9NYA4 1195 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 FAM184BQ9ULE4 1060 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 CUL9Q8IWT3 2517 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 SPTBN5Q9NRC6 3674 aaKnown RBP6.99□□□□□ -1.29
GYPB-205ENST00000505583 ZNF536O15090 1300 aa6.99□□□□□ -1.29
GYPB-205ENST00000505583 PLIN4Q96Q06 1357 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 MOXD2PA6NHM9 499 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 DCDC2CA8MYV0 355 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 PATL2C9JE40 543 aaKnown RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 GALR2O43603 387 aaPredicted RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 NMT2O60551 498 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 ZBED4O75132 1171 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 TIMP1P01033 207 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 APPP05067 770 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 ACRP10323 421 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 FOSL2P15408 326 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 CSF2RAP15509 400 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 CST5P28325 142 aaPredicted RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 COPB2P35606 906 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 TDO2P48775 406 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 BEX3Q00994 111 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 SLFN13Q68D06 897 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.98□□□□□ -1.29
GYPB-205ENST00000505583 ARMCX2Q7L311 632 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms