RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.27
UBE3D-206ENST00000505226 COG1Q8WTW3 980 aa13.33□□□□□ -0.27
UBE3D-206ENST00000505226 CALM1P0DP23 149 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 CALM2P0DP24 149 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 CALM3P0DP25 149 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 SLC35G1Q2M3R5 365 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 SMCR8Q8TEV9 937 aaPredicted RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 HDAC7Q8WUI4 952 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 EIF3CLB5ME19 914 aaKnown RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 PLEKP08567 350 aaPredicted RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 SRGNP10124 158 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 LONP1P36776 959 aaKnown RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 MRPS25P82663 173 aaKnown RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 EZH2Q15910 746 aaKnown RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 CCDC152Q4G0S7 254 aa13.33□□□□□ -0.28
UBE3D-206ENST00000505226 ARL6IP4Q66PJ3 421 aaKnown RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 EIF3CQ99613 913 aaKnown RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 NHEJ1Q9H9Q4 299 aaPredicted RBP13.33□□□□□ -0.28
UBE3D-206ENST00000505226 NOP2P46087 812 aaKnown RBP13.32□□□□□ -0.28
UBE3D-206ENST00000505226 C2orf54Q08AI8 447 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 SKIDA1Q1XH10 827 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 CCNI2Q6ZMN8 369 aaPredicted RBP13.32□□□□□ -0.28
UBE3D-206ENST00000505226 KRT26Q7Z3Y9 468 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 STAG2Q8N3U4 1231 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 MACROD2A1Z1Q3 448 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 M0R2N6 131 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 NTSR2O95665 410 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 KLRK1P26718 216 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 GIMAP8Q8ND71 665 aaPredicted RBP13.32□□□□□ -0.28
UBE3D-206ENST00000505226 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 TUBGCP2Q9BSJ2 902 aa13.32□□□□□ -0.28
UBE3D-206ENST00000505226 EEF1GP26641 437 aaKnown RBP13.31□□□□□ -0.28
UBE3D-206ENST00000505226 STIM1Q13586 685 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 KIAA1328Q86T90 577 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 BLIDQ8IZY5 108 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
UBE3D-206ENST00000505226 SELENOOQ9BVL4 669 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 THAP9Q9H5L6 903 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 KBTBD4Q9NVX7 518 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 ABCA3Q99758 1704 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 MIIPQ5JXC2 388 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 ANKRD40Q6AI12 368 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 ZNF662Q6ZS27 426 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 GPIHBP1Q8IV16 184 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 A0A1B0GUL6 1792 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
UBE3D-206ENST00000505226 TARSL2A2RTX5 802 aaKnown RBP13.31□□□□□ -0.28
UBE3D-206ENST00000505226 RHOBTB3O94955 611 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 EHD4Q9H223 541 aa13.31□□□□□ -0.28
UBE3D-206ENST00000505226 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
UBE3D-206ENST00000505226 DNM2P50570 870 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 KCNB1Q14721 858 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 CREG2Q8IUH2 290 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 HPS3Q969F9 1004 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 FAM84BQ96KN1 310 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 ORC4O43929 436 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 TRIM21P19474 475 aaKnown RBP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 KRT83P78385 493 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 STK4Q13043 487 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 CSGALNACT2Q8N6G5 542 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 EXOC1Q9NV70 894 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 SMARCAL1Q9NZC9 954 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 CAPN6Q9Y6Q1 641 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 EPHB6O15197 1021 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 KRT86O43790 486 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 FCER1AP12319 257 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 TBC1D8BQ0IIM8 1120 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 INF2Q27J81 1249 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 DTHD1Q6ZMT9 781 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 NSUN4Q96CB9 384 aaKnown RBP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 LRWD1Q9UFC0 647 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 DMGDHQ9UI17 866 aaKnown RBP13.3□□□□□ -0.28
UBE3D-206ENST00000505226 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 PCDHA4Q9UN74 947 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
UBE3D-206ENST00000505226 IDEP14735 1019 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 CORO7P57737 925 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 MECOMQ03112 1051 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 ACBD3Q9H3P7 528 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 JADE2Q9NQC1 790 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
UBE3D-206ENST00000505226 FLT1P17948 1338 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 PSMA7O14818 248 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 PPFIA4O75335 1185 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 MAGEA9P43362 315 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 AENQ8WTP8 325 aaKnown RBP13.29□□□□□ -0.28
UBE3D-206ENST00000505226 LRRC1Q9BTT6 524 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 KAT14Q9H8E8 782 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms