RNA–Protein interactions for RNA: ENST00000505220.1

RBM47-204, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-204ENST00000505220 ZBED4O75132 1171 aa20.42■□□□□ 0.86
RBM47-204ENST00000505220 MYOGP15173 224 aa20.42■□□□□ 0.86
RBM47-204ENST00000505220 ATP2A2P16615 1042 aaKnown RBP20.42■□□□□ 0.86
RBM47-204ENST00000505220 BEX3Q00994 111 aa20.42■□□□□ 0.86
RBM47-204ENST00000505220 C16orf86Q6ZW13 317 aa20.42■□□□□ 0.86
RBM47-204ENST00000505220 CPXCR1Q8N123 301 aa20.42■□□□□ 0.86
RBM47-204ENST00000505220 PRPF38AQ8NAV1 312 aaKnown RBP20.42■□□□□ 0.86
RBM47-204ENST00000505220 DNAJC2Q99543 621 aaKnown RBP20.42■□□□□ 0.86
RBM47-204ENST00000505220 FBXO40Q9UH90 709 aa20.42■□□□□ 0.86
RBM47-204ENST00000505220 RIPK3Q9Y572 518 aa20.42■□□□□ 0.86
RBM47-204ENST00000505220 TCRBV5S4A2TA0A5A2 114 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 ITGA7Q13683 1181 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 TMEM67Q5HYA8 995 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 C12orf60Q5U649 245 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 CXCL17Q6UXB2 119 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 SLC43A3Q8NBI5 491 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 NUP88Q99567 741 aaPredicted RBP20.41■□□□□ 0.86
RBM47-204ENST00000505220 UMODL1Q5DID0 1318 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 REV3LO60673 3130 aa20.41■□□□□ 0.86
RBM47-204ENST00000505220 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 ATP2A1O14983 1001 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 PRKAB2O43741 272 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 MBD4O95243 580 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 CCDC144CPQ8IYA2 1237 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 GBF1Q92538 1859 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 NOC4LQ9BVI4 516 aaKnown RBP20.4■□□□□ 0.86
RBM47-204ENST00000505220 MTCH2Q9Y6C9 303 aa20.4■□□□□ 0.86
RBM47-204ENST00000505220 USP17L12C9JPN9 530 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 USP17L21D6R901 530 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 NKX3-2P78367 333 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 TLK2Q86UE8 772 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.85
RBM47-204ENST00000505220 CHST13Q8NET6 341 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 KIFC2Q96AC6 838 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 AP5M1Q9H0R1 490 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 EXOC6BQ9Y2D4 811 aa20.39■□□□□ 0.85
RBM47-204ENST00000505220 CTAGE5O15320 804 aa20.38■□□□□ 0.85
RBM47-204ENST00000505220 CA3P07451 260 aa20.38■□□□□ 0.85
RBM47-204ENST00000505220 PFKMP08237 780 aa20.38■□□□□ 0.85
RBM47-204ENST00000505220 POU3F3P20264 500 aaPredicted RBP20.38■□□□□ 0.85
RBM47-204ENST00000505220 FSCN1Q16658 493 aaKnown RBP20.38■□□□□ 0.85
RBM47-204ENST00000505220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.38■□□□□ 0.85
RBM47-204ENST00000505220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
RBM47-204ENST00000505220 HLA-CQ95604 372 aa20.38■□□□□ 0.85
RBM47-204ENST00000505220 TRPV6Q9H1D0 765 aa20.38■□□□□ 0.85
RBM47-204ENST00000505220 WNT8AQ9H1J5 351 aa20.38■□□□□ 0.85
RBM47-204ENST00000505220 RAVER2Q9HCJ3 691 aaKnown RBP20.38■□□□□ 0.85
RBM47-204ENST00000505220 F5H6K3 240 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 GPR37L1O60883 481 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 KLRC3Q07444 240 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 HSP90AB4PQ58FF6 505 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 ITPRIPQ8IWB1 547 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 SCLYQ96I15 445 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.37■□□□□ 0.85
RBM47-204ENST00000505220 CERS4Q9HA82 394 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 IL1RAPL2Q9NP60 686 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 TRANK1O15050 2925 aa20.37■□□□□ 0.85
RBM47-204ENST00000505220 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.36■□□□□ 0.85
RBM47-204ENST00000505220 SMIM22K7EJ46 135 aa20.36■□□□□ 0.85
RBM47-204ENST00000505220 RFXAPO00287 272 aa20.36■□□□□ 0.85
RBM47-204ENST00000505220 B4GALT4O60513 344 aa20.36■□□□□ 0.85
RBM47-204ENST00000505220 NDUFB10O96000 172 aa20.36■□□□□ 0.85
RBM47-204ENST00000505220 ACTN1P12814 892 aa20.36■□□□□ 0.85
RBM47-204ENST00000505220 FGD4Q96M96 766 aa20.36■□□□□ 0.85
RBM47-204ENST00000505220 SLC38A10Q9HBR0 1119 aa20.36■□□□□ 0.85
RBM47-204ENST00000505220 TLL1O43897 1013 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 ADD2P35612 726 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 OAZ1P54368 228 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 CLASRPQ8N2M8 674 aaKnown RBP20.35■□□□□ 0.85
RBM47-204ENST00000505220 ARNTL2Q8WYA1 636 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 KATNBL1Q9H079 304 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 HOMER2Q9NSB8 354 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 NYAP2Q9P242 653 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 SLC4A4Q9Y6R1 1079 aa20.35■□□□□ 0.85
RBM47-204ENST00000505220 ASTN1O14525 1302 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 FAM86C2PA6NEL3 165 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 ASB14A6NK59 587 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 DYNC1LI2O43237 492 aaPredicted RBP20.34■□□□□ 0.85
RBM47-204ENST00000505220 IFIT2P09913 472 aaKnown RBP20.34■□□□□ 0.85
RBM47-204ENST00000505220 SUPT20HL2P0C7V6 817 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 TTLL4Q14679 1199 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 DEFB128Q7Z7B8 93 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 SLC9A7Q96T83 725 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 MKNK2Q9HBH9 465 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 PAG1Q9NWQ8 432 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 ARPP21Q9UBL0 812 aaPredicted RBP20.34■□□□□ 0.85
RBM47-204ENST00000505220 FEM1BQ9UK73 627 aa20.34■□□□□ 0.85
RBM47-204ENST00000505220 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
RBM47-204ENST00000505220 LRRC37A2A6NM11 1700 aa20.33■□□□□ 0.85
RBM47-204ENST00000505220 GRIN2DO15399 1336 aa20.33■□□□□ 0.85
RBM47-204ENST00000505220 KIF28PB7ZC32 967 aa20.33■□□□□ 0.85
RBM47-204ENST00000505220 CNTN2Q02246 1040 aa20.33■□□□□ 0.85
RBM47-204ENST00000505220 CEP85Q6P2H3 762 aa20.33■□□□□ 0.85
RBM47-204ENST00000505220 CTR9Q6PD62 1173 aa20.33■□□□□ 0.85
RBM47-204ENST00000505220 ALYREFQ86V81 257 aaKnown RBP20.33■□□□□ 0.85
RBM47-204ENST00000505220 RHPN1Q8TCX5 695 aa20.33■□□□□ 0.85
RBM47-204ENST00000505220 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.33■□□□□ 0.85
RBM47-204ENST00000505220 ALDH8A1Q9H2A2 487 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms