RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 PUS7LQ9H0K6 701 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 YBX2Q9Y2T7 364 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 MYADML2A6NDP7 307 aa19.16■□□□□ 0.66
PDLIM7-213ENST00000505074 SMIM22K7EJ46 135 aa19.16■□□□□ 0.66
PDLIM7-213ENST00000505074 SKIV2LQ15477 1246 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-213ENST00000505074 SIAH1Q8IUQ4 282 aa19.16■□□□□ 0.66
PDLIM7-213ENST00000505074 STK11IPQ8N1F8 1099 aa19.16■□□□□ 0.66
PDLIM7-213ENST00000505074 CCDC17Q96LX7 622 aa19.16■□□□□ 0.66
PDLIM7-213ENST00000505074 MCM3APO60318 1980 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 VWA5AO00534 786 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 SNAI1O95863 264 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 CYP2C18P33260 490 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 KCNQ1P51787 676 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 PPP2R2DQ66LE6 453 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 C16orf86Q6ZW13 317 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 DDX11Q96FC9 970 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 EPHX3Q9H6B9 360 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 FBXO28Q9NVF7 368 aa19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 ARPP21Q9UBL0 812 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 ZNF214Q9UL59 606 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-213ENST00000505074 ERC2O15083 957 aa19.14■□□□□ 0.65
PDLIM7-213ENST00000505074 GNASQ5JWF2 1037 aa19.14■□□□□ 0.65
PDLIM7-213ENST00000505074 TMEM31Q5JXX7 168 aa19.14■□□□□ 0.65
PDLIM7-213ENST00000505074 CTR9Q6PD62 1173 aa19.14■□□□□ 0.65
PDLIM7-213ENST00000505074 MAMDC4Q6UXC1 1216 aa19.14■□□□□ 0.65
PDLIM7-213ENST00000505074 OTOP2Q7RTS6 562 aa19.14■□□□□ 0.65
PDLIM7-213ENST00000505074 PPP1R9AQ9ULJ8 1098 aa19.14■□□□□ 0.65
PDLIM7-213ENST00000505074 CD4P01730 458 aa19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 EEF2P13639 858 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 GJA9P57773 515 aa19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 IRX5P78411 483 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 ACVR2BQ13705 512 aa19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 UPF3AQ9H1J1 476 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 DCTPP1Q9H773 170 aa19.13■□□□□ 0.65
PDLIM7-213ENST00000505074 MINDY4BA8MYZ0 360 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 RABGGTBP53611 331 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 ABHD16BQ9H3Z7 469 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 HIPK3Q9H422 1215 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 MKNK2Q9HBH9 465 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 GOPCQ9HD26 462 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 PCDHA11Q9Y5I1 949 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 SLC4A7Q9Y6M7 1214 aa19.12■□□□□ 0.65
PDLIM7-213ENST00000505074 LRRC37A2A6NM11 1700 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 GTPBP6O43824 516 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 APPP05067 770 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 TDO2P48775 406 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 CCDC144BQ3MJ40 725 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 REPS2Q8NFH8 660 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 APPBP2Q92624 585 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 STRBPQ96SI9 672 aaKnown RBP19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 TEX13BQ9BXU2 312 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 KANSL2Q9H9L4 492 aa19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-213ENST00000505074 DNAJC25-GNG10A0A024R161 153 aa19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 RNF113AO15541 343 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 ZFYP08048 801 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 LRRFIP1Q32MZ4 808 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 SNRNP48Q6IEG0 339 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 RPUSD2Q8IZ73 545 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 OSBP2Q969R2 916 aa19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 COG5Q9UP83 839 aa19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 REV3LO60673 3130 aa19.1■□□□□ 0.65
PDLIM7-213ENST00000505074 CHD7Q9P2D1 2997 aa19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 GPAA1O43292 621 aa19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 ADCY6O43306 1168 aa19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 MYOGP15173 224 aa19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 CCL23P55773 120 aa19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 FAM83BQ5T0W9 1011 aa19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 ZBTB47Q9UFB7 747 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 PRRC2BQ5JSZ5 2229 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-213ENST00000505074 UMODL1Q5DID0 1318 aa19.08■□□□□ 0.65
PDLIM7-213ENST00000505074 ZBBXA8MT70 800 aa19.08■□□□□ 0.64
PDLIM7-213ENST00000505074 GSG1L2A8MUP6 293 aa19.08■□□□□ 0.64
PDLIM7-213ENST00000505074 POU3F3P20264 500 aaPredicted RBP19.08■□□□□ 0.64
PDLIM7-213ENST00000505074 FSD1Q9BTV5 496 aa19.08■□□□□ 0.64
PDLIM7-213ENST00000505074 MTCH2Q9Y6C9 303 aa19.08■□□□□ 0.64
PDLIM7-213ENST00000505074 M0R2C6 588 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 GPR37L1O60883 481 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 CABYRO75952 493 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 ATP2A2P16615 1042 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 GNAT2P19087 354 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 SLC4A3P48751 1232 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 SBK1Q52WX2 424 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 GIMAP6Q6P9H5 292 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 SLC43A3Q8NBI5 491 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 SLF1Q9BQI6 1058 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 SEZ6LQ9BYH1 1024 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 RIPK3Q9Y572 518 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 MYH4Q9Y623 1939 aa19.07■□□□□ 0.64
PDLIM7-213ENST00000505074 TTC41PQ6P2S7 1318 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 GREB1LQ9C091 1923 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 TLL1O43897 1013 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 RASA1P20936 1047 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 NKX3-2P78367 333 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 BEX3Q00994 111 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 ITGA7Q13683 1181 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 TMEM67Q5HYA8 995 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 CXCL17Q6UXB2 119 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms