RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 RASGRF1Q13972 1273 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 FOXD4L6Q3SYB3 417 aaPredicted RBP6.03□□□□□ -1.44
CDH9-203ENST00000505045 CAVIN4Q5BKX8 364 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 APOBEC3HQ6NTF7 200 aaKnown RBP6.03□□□□□ -1.44
CDH9-203ENST00000505045 FOXD4L3Q6VB84 417 aaPredicted RBP6.03□□□□□ -1.44
CDH9-203ENST00000505045 TSEN2Q8NCE0 465 aaKnown RBP6.03□□□□□ -1.44
CDH9-203ENST00000505045 LPIN2Q92539 896 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 MDFIQ99750 246 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 MCOLN1Q9GZU1 580 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 FOCADQ5VW36 1801 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 PDE4DIPQ5VU43 2346 aa6.03□□□□□ -1.44
CDH9-203ENST00000505045 PHIPQ8WWQ0 1821 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 ATAD5Q96QE3 1844 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 IGF2BP3O00425 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
CDH9-203ENST00000505045 KHNYNO15037 678 aaKnown RBP6.02□□□□□ -1.45
CDH9-203ENST00000505045 MYO1BO43795 1136 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 FRAT2O75474 233 aaPredicted RBP6.02□□□□□ -1.45
CDH9-203ENST00000505045 USP2O75604 605 aaPredicted RBP6.02□□□□□ -1.45
CDH9-203ENST00000505045 TBC1D8O95759 1140 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 CD33P20138 364 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 NF2P35240 595 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 MMP14P50281 582 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 TIMM10P62072 90 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 CAP1Q01518 475 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 TFCP2Q12800 502 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 NFIAQ12857 509 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 MAP3K11Q16584 847 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 LINC00114Q6XXX2 140 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 STAG2Q8N3U4 1231 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 ZNF384Q8TF68 577 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 SAGE1Q9NXZ1 904 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 DAGLAQ9Y4D2 1042 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 PPP2R3BQ9Y5P8 575 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 RANBP2P49792 3224 aaKnown RBP6.02□□□□□ -1.45
CDH9-203ENST00000505045 DOCK1Q14185 1865 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 A0A1B0GUL7 405 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 IL15P40933 162 aaPredicted RBP6.02□□□□□ -1.45
CDH9-203ENST00000505045 PTK7Q13308 1070 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 DGKZQ13574 1117 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 VGLL4Q14135 290 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 ZKSCAN2Q63HK3 967 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.02□□□□□ -1.45
CDH9-203ENST00000505045 ARMC9Q7Z3E5 817 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 FCHSD1Q86WN1 690 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 TBC1D22AQ8WUA7 517 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 TEKT1Q969V4 418 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 WNK4Q96J92 1243 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 BTBD6Q96KE9 485 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 CALR3Q96L12 384 aaKnown RBP6.02□□□□□ -1.45
CDH9-203ENST00000505045 ELP3Q9H9T3 547 aa6.02□□□□□ -1.45
CDH9-203ENST00000505045 ATRNL1Q5VV63 1379 aa6.01□□□□□ -1.45
CDH9-203ENST00000505045 RPAP1Q9BWH6 1393 aaPredicted RBP6.01□□□□□ -1.45
CDH9-203ENST00000505045 GNAI3P08754 354 aa6.01□□□□□ -1.45
CDH9-203ENST00000505045 RASA1P20936 1047 aa6.01□□□□□ -1.45
CDH9-203ENST00000505045 CRTC2Q53ET0 693 aaPredicted RBP6.01□□□□□ -1.45
CDH9-203ENST00000505045 ZFPM1Q8IX07 1006 aa6.01□□□□□ -1.45
CDH9-203ENST00000505045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.01□□□□□ -1.45
CDH9-203ENST00000505045 PANK1Q8TE04 598 aa6.01□□□□□ -1.45
CDH9-203ENST00000505045 ZNF296Q8WUU4 475 aaPredicted RBP6.01□□□□□ -1.45
CDH9-203ENST00000505045 PTPN18Q99952 460 aa6.01□□□□□ -1.45
CDH9-203ENST00000505045 MARK1Q9P0L2 795 aa6.01□□□□□ -1.45
CDH9-203ENST00000505045 SALL1Q9NSC2 1324 aa6□□□□□ -1.45
CDH9-203ENST00000505045 GNAI2P04899 355 aa6□□□□□ -1.45
CDH9-203ENST00000505045 TM4SF4P48230 202 aa6□□□□□ -1.45
CDH9-203ENST00000505045 SEC13P55735 322 aa6□□□□□ -1.45
CDH9-203ENST00000505045 HDLBPQ00341 1268 aaKnown RBP6□□□□□ -1.45
CDH9-203ENST00000505045 TCP10Q12799 353 aa6□□□□□ -1.45
CDH9-203ENST00000505045 TNFAIP1Q13829 316 aa6□□□□□ -1.45
CDH9-203ENST00000505045 CDC42EP5Q6NZY7 148 aa6□□□□□ -1.45
CDH9-203ENST00000505045 LRRC69Q6ZNQ3 347 aa6□□□□□ -1.45
CDH9-203ENST00000505045 ITPRIPQ8IWB1 547 aa6□□□□□ -1.45
CDH9-203ENST00000505045 OPTNQ96CV9 577 aa6□□□□□ -1.45
CDH9-203ENST00000505045 PHACTR1Q9C0D0 580 aa6□□□□□ -1.45
CDH9-203ENST00000505045 TLR7Q9NYK1 1049 aaKnown RBP6□□□□□ -1.45
CDH9-203ENST00000505045 ZNF232Q9UNY5 417 aa6□□□□□ -1.45
CDH9-203ENST00000505045 SNCAIPQ9Y6H5 919 aa6□□□□□ -1.45
CDH9-203ENST00000505045 KIAA0100Q14667 2235 aaKnown RBP6□□□□□ -1.45
CDH9-203ENST00000505045 DDX60LQ5H9U9 1706 aaKnown RBP6□□□□□ -1.45
CDH9-203ENST00000505045 GAKO14976 1311 aa6□□□□□ -1.45
CDH9-203ENST00000505045 LAMA3Q16787 3333 aa6□□□□□ -1.45
CDH9-203ENST00000505045 CCDC85CA6NKD9 419 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 FAM196BA6NMK8 535 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 IPO8O15397 1037 aaKnown RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 PPP1R12BO60237 982 aaPredicted RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 LDHBP07195 334 aaKnown RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 ZBTB48P10074 688 aaPredicted RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 INPP5BP32019 993 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 MCAMP43121 646 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 GRIN2CQ14957 1233 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 SUPT20HL1Q3ZLR7 823 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 HHIPL2Q6UWX4 724 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 MIGA2Q7L4E1 593 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 ANKRD13AQ8IZ07 590 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 WDR66Q8TBY9 1149 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 RHPN1Q8TCX5 695 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 ZKSCAN4Q969J2 545 aaPredicted RBP5.99□□□□□ -1.45
CDH9-203ENST00000505045 WRNIP1Q96S55 665 aa5.99□□□□□ -1.45
CDH9-203ENST00000505045 C2orf49Q9BVC5 232 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms