RNA–Protein interactions for RNA: ENST00000504971.1

FBXO38-208, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-208	ENST00000504971	MTRF1	O75570	445 aa	Known RBP	7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	A1BG	P04217	495 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	CCNC	P24863	283 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	OAS2	P29728	719 aa	Known RBP	7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	DDIT3	P35638	169 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	GTF2A1	P52655	376 aa	Predicted RBP	7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	ARID5A	Q03989	594 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	CCDC15	Q0P6D6	951 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	AIMP1	Q12904	312 aa	Known RBP	7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	WTAP	Q15007	396 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	PTPN14	Q15678	1187 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	SLC4A8	Q2Y0W8	1093 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	C8orf34	Q49A92	452 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	DNAJC21	Q5F1R6	531 aa	Known RBP	7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	SPECC1	Q5M775	1068 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	WDR45B	Q5MNZ6	344 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	ISM2	Q6H9L7	571 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	PDXDC2P	Q6P474	469 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	CPXCR1	Q8N123	301 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	TAF4B	Q92750	862 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	RIC8A	Q9NPQ8	531 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	TMOD4	Q9NZQ9	345 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	EPS15L1	Q9UBC2	864 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	GJA3	Q9Y6H8	435 aa		7.71	□□□□□ -1.18
FBXO38-208	ENST00000504971	COL5A3	P25940	1745 aa	Predicted RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	LOC102724428	A0A0B4J2F2	783 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	FIGNL2	A6NMB9	653 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	HMGB2	P26583	209 aa	Known RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	HOXD10	P28358	340 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	PPM1F	P49593	454 aa	Predicted RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	CLK2	P49760	499 aa	Known RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	CASP7	P55210	303 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	SIK1	P57059	783 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	SNX16	P57768	344 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	TCIRG1	Q13488	830 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	CWF19L2	Q2TBE0	894 aa	Known RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	RABL6	Q3YEC7	729 aa	Predicted RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	COBLL1	Q53SF7	1204 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	PLEKHG4	Q58EX7	1191 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	BMP2KL	Q5H9B9	411 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	C10orf62	Q5T681	223 aa	Predicted RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	ERC1	Q8IUD2	1116 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	CLASRP	Q8N2M8	674 aa	Known RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	PHC3	Q8NDX5	983 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	APPL2	Q8NEU8	664 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	SKA1	Q96BD8	255 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	SYTL4	Q96C24	671 aa	Predicted RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	GPR101	Q96P66	508 aa	Predicted RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	MYD88	Q99836	296 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	MMTAG2	Q9BU76	263 aa	Known RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	ISCA1	Q9BUE6	129 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	CSRNP2	Q9H175	543 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	OSBPL3	Q9H4L5	887 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	QPCTL	Q9NXS2	382 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	CLIP2	Q9UDT6	1046 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	CDV3	Q9UKY7	258 aa	Known RBP	7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	ATP6V0A2	Q9Y487	856 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	MAP3K15	Q6ZN16	1313 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	PALLD	Q8WX93	1383 aa		7.7	□□□□□ -1.18
FBXO38-208	ENST00000504971	AFDN	P55196	1824 aa	Known RBP	7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	PNMA6E	A0A0J9YXQ4	647 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	BBOX1	O75936	387 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	ARHGEF15	O94989	841 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	HOXC13	P31276	330 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	MORC3	Q14149	939 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	ZSCAN26	Q16670	478 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	KIF6	Q6ZMV9	814 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	TTLL7	Q6ZT98	887 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	PPP1R42	Q7Z4L9	355 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	CCAR2	Q8N163	923 aa	Known RBP	7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	GOLGA6L1	Q8N7Z2	621 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	FAM184A	Q8NB25	1140 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	GABPB2	Q8TAK5	448 aa	Predicted RBP	7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	KAZALD1	Q96I82	304 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	TMEM87B	Q96K49	555 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	KCTD15	Q96SI1	283 aa	Predicted RBP	7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	VEZT	Q9HBM0	779 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	CCDC87	Q9NVE4	849 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	RABL2A	Q9UBK7	228 aa	Predicted RBP	7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	ZMAT5	Q9UDW3	170 aa	Known RBP	7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	ITM2B	Q9Y287	266 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	ANKRD36C	Q5JPF3	1778 aa		7.69	□□□□□ -1.18
FBXO38-208	ENST00000504971	SBF2	Q86WG5	1849 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	PALM3	A6NDB9	673 aa	Predicted RBP	7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	FOXN3	O00409	490 aa	Predicted RBP	7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	SOCS7	O14512	581 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	SRGAP3	O43295	1099 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	ZSCAN20	P17040	1043 aa	Predicted RBP	7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	ITGA6	P23229	1130 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	TNNT3	P45378	269 aa	Predicted RBP	7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	TPD52	P55327	224 aa	Predicted RBP	7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	EXOSC10	Q01780	885 aa	Known RBP	7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	TRAF1	Q13077	416 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	PTK7	Q13308	1070 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	TOMM20	Q15388	145 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	AP1AR	Q63HQ0	302 aa		7.68	□□□□□ -1.18
FBXO38-208	ENST00000504971	ZNF772	Q68DY9	489 aa	Predicted RBP	7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms