RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ADD2P35612 726 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 PLA2G5P39877 138 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 RABGGTBP53611 331 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 CCL23P55773 120 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 ACVR2BQ13705 512 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 CCDC144BQ3MJ40 725 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 C12orf60Q5U649 245 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 CCSAPQ6IQ19 270 aaPredicted RBP8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 CXCL17Q6UXB2 119 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 C16orf86Q6ZW13 317 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 OTOP2Q7RTS6 562 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 CLASRPQ8N2M8 674 aaKnown RBP8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 TSPYL2Q9H2G4 693 aaPredicted RBP8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 MTIF3Q9H2K0 278 aaKnown RBP8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 HIPK3Q9H422 1215 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 SLC28A3Q9HAS3 691 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 RAVER2Q9HCJ3 691 aaKnown RBP8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 HOMER2Q9NSB8 354 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 ATP8A2Q9NTI2 1148 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 PAG1Q9NWQ8 432 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 YBX2Q9Y2T7 364 aaKnown RBP8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 SLC4A4Q9Y6R1 1079 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 MYO9BQ13459 2157 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 UMODL1Q5DID0 1318 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 DNAJC25-GNG10A0A024R161 153 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 ZBBXA8MT70 800 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 NDUFB10O96000 172 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 FGBP02675 491 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 MYOGP15173 224 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 PTGS1P23219 599 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 CDK7P50613 346 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 TFF2Q03403 129 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 PPP2R2DQ66LE6 453 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 ARMCX2Q7L311 632 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 MSL3Q8N5Y2 521 aaKnown RBP8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 HERVK_113Q902F9 699 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 CHMP4CQ96CF2 233 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 FAM212AQ96EL1 285 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 FGD4Q96M96 766 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 IL23AQ9NPF7 189 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 MCM3APO60318 1980 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 GBF1Q92538 1859 aa8.27□□□□□ -1.09
NPIPB3-203ENST00000504841 TCF20Q9UGU0 1960 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 F5H6K3 240 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 ZBED4O75132 1171 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 KCNQ1P51787 676 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 GJA9P57773 515 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 KLRC3Q07444 240 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 HSP90AB4PQ58FF6 505 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 CTR9Q6PD62 1173 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 MAMDC4Q6UXC1 1216 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 CCDC144CPQ8IYA2 1237 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 PANK1Q8TE04 598 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 KIF1BPQ96EK5 621 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 UPF3AQ9H1J1 476 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 ABHD16BQ9H3Z7 469 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 MKNK2Q9HBH9 465 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 ARPP21Q9UBL0 812 aaPredicted RBP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 DDX49Q9Y6V7 483 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 EYSQ5T1H1 3165 aa8.26□□□□□ -1.09
NPIPB3-203ENST00000504841 VCANP13611 3396 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 MINDY4BA8MYZ0 360 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 CTAGE5O15320 804 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 CD4P01730 458 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 PSMC6P62333 389 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 CNTN2Q02246 1040 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 TNFAIP2Q03169 654 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 EEPD1Q7L9B9 569 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 ZNF467Q7Z7K2 595 aaPredicted RBP8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 TLK2Q86UE8 772 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 ZNF579Q8NAF0 562 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 PRPF38AQ8NAV1 312 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 SCLYQ96I15 445 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 PUS7LQ9H0K6 701 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 WNT8AQ9H1J5 351 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 CERS4Q9HA82 394 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 CLIP2Q9UDT6 1046 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 SLC4A7Q9Y6M7 1214 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 ASTN1O14525 1302 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 ZBED9Q6R2W3 1325 aa8.25□□□□□ -1.09
NPIPB3-203ENST00000504841 CDH23Q9H251 3354 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 RFXAPO00287 272 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 B4GALT4O60513 344 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 PRDM1O75626 825 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 ATP2A2P16615 1042 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 RASA1P20936 1047 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 IKQ13123 557 aaPredicted RBP8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 ITGA7Q13683 1181 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 UBE3CQ15386 1083 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 FSCN1Q16658 493 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 DEFB128Q7Z7B8 93 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 FBXO16Q8IX29 292 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms