RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 EVI5LQ96CN4 794 aa9.22□□□□□ -0.93
MATR3-210ENST00000504643 RNPC3Q96LT9 517 aaKnown RBP9.22□□□□□ -0.93
MATR3-210ENST00000504643 MPHOSPH6Q99547 160 aaKnown RBP9.22□□□□□ -0.93
MATR3-210ENST00000504643 NUP88Q99567 741 aaPredicted RBP9.22□□□□□ -0.93
MATR3-210ENST00000504643 MAF1Q9H063 256 aa9.22□□□□□ -0.93
MATR3-210ENST00000504643 MTIF3Q9H2K0 278 aaKnown RBP9.22□□□□□ -0.93
MATR3-210ENST00000504643 RIPK3Q9Y572 518 aa9.22□□□□□ -0.93
MATR3-210ENST00000504643 FRMPD3Q5JV73 1810 aa9.22□□□□□ -0.93
MATR3-210ENST00000504643 SYNRGQ9UMZ2 1314 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 TSPY2A6NKD2 308 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 PQBP1O60828 265 aaKnown RBP9.21□□□□□ -0.93
MATR3-210ENST00000504643 PCP11498 1178 aaKnown RBP9.21□□□□□ -0.93
MATR3-210ENST00000504643 TAL1P17542 331 aaPredicted RBP9.21□□□□□ -0.93
MATR3-210ENST00000504643 MX1P20591 662 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 SLC4A3P48751 1232 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 ALX1Q15699 326 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 C20orf194Q5TEA3 1177 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 IQSEC1Q6DN90 963 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 CCSAPQ6IQ19 270 aaPredicted RBP9.21□□□□□ -0.93
MATR3-210ENST00000504643 ARMCX2Q7L311 632 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 EPB41L4AQ9HCS5 686 aaPredicted RBP9.21□□□□□ -0.93
MATR3-210ENST00000504643 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 ANAPC4Q9UJX5 808 aa9.21□□□□□ -0.93
MATR3-210ENST00000504643 B4DLN1 442 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 SMIM22K7EJ46 135 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 M0R2C6 588 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 ARVCFO00192 962 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 CHGBP05060 677 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 C6orf222P0C671 652 aaPredicted RBP9.21□□□□□ -0.94
MATR3-210ENST00000504643 CDK7P50613 346 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 MRPL12P52815 198 aaKnown RBP9.21□□□□□ -0.94
MATR3-210ENST00000504643 FAAP100Q0VG06 881 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 CCDC144BQ3MJ40 725 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 GNASQ5JWF2 1037 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 MFSD5Q6N075 450 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.21□□□□□ -0.94
MATR3-210ENST00000504643 GUCD1Q96NT3 240 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 AP5M1Q9H0R1 490 aa9.21□□□□□ -0.94
MATR3-210ENST00000504643 BAZ2AQ9UIF9 1905 aaKnown RBP9.21□□□□□ -0.94
MATR3-210ENST00000504643 PRDM1O75626 825 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 ASGR1P07306 291 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 MFAP1P55081 439 aaKnown RBP9.2□□□□□ -0.94
MATR3-210ENST00000504643 TNFAIP2Q03169 654 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 STK11IPQ8N1F8 1099 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 PI4K2BQ8TCG2 481 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 DCAF4Q8WV16 495 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
MATR3-210ENST00000504643 ADD3Q9UEY8 706 aaKnown RBP9.2□□□□□ -0.94
MATR3-210ENST00000504643 ISY1Q9ULR0 285 aaKnown RBP9.2□□□□□ -0.94
MATR3-210ENST00000504643 MYH7P12883 1935 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 ORC4O43929 436 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 C9orf50Q5SZB4 431 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 FAM133AQ8N9E0 248 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 TTC14Q96N46 770 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 CDX2Q99626 313 aaPredicted RBP9.2□□□□□ -0.94
MATR3-210ENST00000504643 RNF146Q9NTX7 359 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 TCP11L1Q9NUJ3 509 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 STX8Q9UNK0 236 aa9.2□□□□□ -0.94
MATR3-210ENST00000504643 CCDC178Q5BJE1 867 aa9.19□□□□□ -0.94
MATR3-210ENST00000504643 PSRC1Q6PGN9 363 aaPredicted RBP9.19□□□□□ -0.94
MATR3-210ENST00000504643 NOL8Q76FK4 1167 aaKnown RBP9.19□□□□□ -0.94
MATR3-210ENST00000504643 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
MATR3-210ENST00000504643 LRRC47Q8N1G4 583 aaKnown RBP9.19□□□□□ -0.94
MATR3-210ENST00000504643 ZNFX1Q9P2E3 1918 aaKnown RBP9.19□□□□□ -0.94
MATR3-210ENST00000504643 FGRP09769 529 aa9.19□□□□□ -0.94
MATR3-210ENST00000504643 MCCP23508 829 aa9.19□□□□□ -0.94
MATR3-210ENST00000504643 NOVP48745 357 aa9.19□□□□□ -0.94
MATR3-210ENST00000504643 BRDTQ58F21 947 aaPredicted RBP9.19□□□□□ -0.94
MATR3-210ENST00000504643 VTA1Q9NP79 307 aa9.19□□□□□ -0.94
MATR3-210ENST00000504643 TBX21Q9UL17 535 aa9.19□□□□□ -0.94
MATR3-210ENST00000504643 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.19□□□□□ -0.942e-13■□□□□ 8.8
MATR3-210ENST00000504643 GREB1LQ9C091 1923 aaPredicted RBP9.19□□□□□ -0.94
MATR3-210ENST00000504643 RANBP2P49792 3224 aaKnown RBP9.19□□□□□ -0.94
MATR3-210ENST00000504643 RANBP6O60518 1105 aaKnown RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 ICAM1P05362 532 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 SUPT20HL2P0C7V6 817 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 BTNL9Q6UXG8 535 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 RPUSD2Q8IZ73 545 aaKnown RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 MAFAQ8NHW3 353 aaPredicted RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 A1CFQ9NQ94 594 aaKnown RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 PARP14Q460N5 1801 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 KPNA6O60684 536 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 TOP1P11387 765 aaKnown RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 ALAS1P13196 640 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 MCMDC2Q4G0Z9 681 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 ANKRD45Q5TZF3 282 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 SLC43A3Q8NBI5 491 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 MORC4Q8TE76 937 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 RNF41Q9H4P4 317 aaPredicted RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 POLR3EQ9NVU0 708 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 ZMYM6O95789 1325 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 NKRFO15226 690 aaKnown RBP eCLIP9.18□□□□□ -0.94
MATR3-210ENST00000504643 FOSL2P15408 326 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 RAB30Q15771 203 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 FSCN1Q16658 493 aaKnown RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 TSHZ3Q63HK5 1081 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 AGBL1Q96MI9 1066 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms