RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 MCTP1Q6DN14 999 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 RGS22Q8NE09 1264 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 CCDC12Q8WUD4 166 aaPredicted RBP13.08□□□□□ -0.32
TRIO-206ENST00000504606 COA7Q96BR5 231 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 SHISA4Q96DD7 197 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 ATG4CQ96DT6 458 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 AMNQ9BXJ7 453 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 AGTPBP1Q9UPW5 1226 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
TRIO-206ENST00000504606 CCL15-CCL14A0A0B4J2E2 113 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 ZBED4O75132 1171 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 CETPP11597 493 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 HOXA7P31268 230 aaPredicted RBP13.07□□□□□ -0.32
TRIO-206ENST00000504606 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
TRIO-206ENST00000504606 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRIO-206ENST00000504606 MOGSQ13724 837 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 CCL15Q16663 113 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 USH1GQ495M9 461 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
TRIO-206ENST00000504606 RLFQ13129 1914 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 SLC10A3P09131 477 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 FDX1P10109 184 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 TAL1P17542 331 aaPredicted RBP13.06□□□□□ -0.32
TRIO-206ENST00000504606 OSBPP22059 807 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 CALML3P27482 149 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 KRT2P35908 639 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 KIF23Q02241 960 aaPredicted RBP13.06□□□□□ -0.32
TRIO-206ENST00000504606 TRAF1Q13077 416 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 RESTQ13127 1097 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 GNL2Q13823 731 aaKnown RBP13.06□□□□□ -0.32
TRIO-206ENST00000504606 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 PPP1R18Q6NYC8 613 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
TRIO-206ENST00000504606 SLC38A10Q9HBR0 1119 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 BRMS1Q9HCU9 246 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 C6orf50Q9HD87 102 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 HOXC10Q9NYD6 342 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 PCDHA1Q9Y5I3 950 aa13.06□□□□□ -0.32
TRIO-206ENST00000504606 ESYT2A0FGR8 921 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 SPDYE16A6NNV3 312 aaPredicted RBP13.05□□□□□ -0.32
TRIO-206ENST00000504606 KIF28PB7ZC32 967 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 VWA5AO00534 786 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 ICAM1P05362 532 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
TRIO-206ENST00000504606 CPXCR1Q8N123 301 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
TRIO-206ENST00000504606 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
TRIO-206ENST00000504606 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 ASCC2Q9H1I8 757 aaPredicted RBP13.05□□□□□ -0.32
TRIO-206ENST00000504606 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
TRIO-206ENST00000504606 RAVER2Q9HCJ3 691 aaKnown RBP13.05□□□□□ -0.32
TRIO-206ENST00000504606 CCPG1Q9ULG6 757 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 PCDHA4Q9UN74 947 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 ZNF536O15090 1300 aa13.05□□□□□ -0.32
TRIO-206ENST00000504606 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
TRIO-206ENST00000504606 BTBD18B2RXH4 712 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 BTBD19C9JJ37 291 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 GNA11P29992 359 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 NPY5RQ15761 445 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 FOXD4L6Q3SYB3 417 aaPredicted RBP13.04□□□□□ -0.32
TRIO-206ENST00000504606 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 FOXD4L3Q6VB84 417 aaPredicted RBP13.04□□□□□ -0.32
TRIO-206ENST00000504606 ANKRD23Q86SG2 305 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 REPS2Q8NFH8 660 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 HHIPL1Q96JK4 782 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 P2RX7Q99572 595 aaKnown RBP13.04□□□□□ -0.32
TRIO-206ENST00000504606 FOXP1Q9H334 677 aaPredicted RBP13.04□□□□□ -0.32
TRIO-206ENST00000504606 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 PNMA2Q9UL42 364 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 ADAMTS5Q9UNA0 930 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 ABCB11O95342 1321 aa13.04□□□□□ -0.32
TRIO-206ENST00000504606 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
TRIO-206ENST00000504606 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
TRIO-206ENST00000504606 FAM155AB1AL88 458 aaPredicted RBP13.03□□□□□ -0.32
TRIO-206ENST00000504606 PDHXO00330 501 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 ALAS1P13196 640 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 APLP1P51693 650 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 ADCY7P51828 1080 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 OAZ1P54368 228 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 HERVK_113P62684 666 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 GRM1Q13255 1194 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 NR5A1Q13285 461 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 FAM173BQ6P4H8 233 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 CUL5Q93034 780 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms