RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 ANKRD35Q8N283 1001 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 MSL3Q8N5Y2 521 aaKnown RBP24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 RANBP17Q9H2T7 1088 aaKnown RBP24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 ACAD9Q9H845 621 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 GPCPD1Q9NPB8 672 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 NRBP1Q9UHY1 535 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 RBM8AQ9Y5S9 174 aaKnown RBP24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 FRMPD2Q68DX3 1309 aaPredicted RBP24.83■■□□□ 1.56
TRAPPC11-203ENST00000504526 CNGA1P29973 690 aa24.82■■□□□ 1.56
TRAPPC11-203ENST00000504526 SLC16A2P36021 539 aa24.82■■□□□ 1.56
TRAPPC11-203ENST00000504526 TTBK2Q6IQ55 1244 aa24.82■■□□□ 1.56
TRAPPC11-203ENST00000504526 NCOA7Q8NI08 942 aa24.82■■□□□ 1.56
TRAPPC11-203ENST00000504526 AGBL1Q96MI9 1066 aa24.82■■□□□ 1.56
TRAPPC11-203ENST00000504526 DNAJC25-GNG10A0A024R161 153 aa24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 E7EWF7 191 aa24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 ICAM1P05362 532 aa24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 IFIT1BQ5T764 474 aaKnown RBP24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 LHX8Q68G74 356 aa24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 CCDC174Q6PII3 467 aa24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 TINF2Q9BSI4 451 aa24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 LSG1Q9H089 658 aaKnown RBP24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 RNF146Q9NTX7 359 aa24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 DDX20Q9UHI6 824 aaKnown RBP24.81■■□□□ 1.56
TRAPPC11-203ENST00000504526 ALAS1P13196 640 aa24.8■■□□□ 1.56
TRAPPC11-203ENST00000504526 CYB5R4Q7L1T6 521 aa24.8■■□□□ 1.56
TRAPPC11-203ENST00000504526 NECAB2Q7Z6G3 386 aa24.8■■□□□ 1.56
TRAPPC11-203ENST00000504526 ZNF467Q7Z7K2 595 aaPredicted RBP24.8■■□□□ 1.56
TRAPPC11-203ENST00000504526 HOMER2Q9NSB8 354 aa24.8■■□□□ 1.56
TRAPPC11-203ENST00000504526 CCPG1Q9ULG6 757 aa24.8■■□□□ 1.56
TRAPPC11-203ENST00000504526 ZNFX1Q9P2E3 1918 aaKnown RBP24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 CDC45O75419 566 aa24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 SLC34A2O95436 690 aa24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 SART3Q15020 963 aaKnown RBP24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 SEC23AQ15436 765 aa24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 ASPRV1Q53RT3 343 aa24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 TRERF1Q96PN7 1200 aa24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 ANO2Q9NQ90 1003 aa24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 BRCA2P51587 3418 aa24.79■■□□□ 1.56
TRAPPC11-203ENST00000504526 ERICH2A1L162 156 aa24.78■■□□□ 1.56
TRAPPC11-203ENST00000504526 SEPT4O43236 478 aa24.78■■□□□ 1.56
TRAPPC11-203ENST00000504526 SNAP25P60880 206 aa24.78■■□□□ 1.56
TRAPPC11-203ENST00000504526 TRPV1Q8NER1 839 aa24.78■■□□□ 1.56
TRAPPC11-203ENST00000504526 PAWRQ96IZ0 340 aaKnown RBP24.78■■□□□ 1.56
TRAPPC11-203ENST00000504526 PFASO15067 1338 aa24.78■■□□□ 1.56
TRAPPC11-203ENST00000504526 SYNGAP1Q96PV0 1343 aa24.78■■□□□ 1.56
TRAPPC11-203ENST00000504526 MAMDC4Q6UXC1 1216 aa24.77■■□□□ 1.56
TRAPPC11-203ENST00000504526 A1CFQ9NQ94 594 aaKnown RBP24.77■■□□□ 1.56
TRAPPC11-203ENST00000504526 CNPY2Q9Y2B0 182 aa24.77■■□□□ 1.56
TRAPPC11-203ENST00000504526 IFIT3O14879 490 aaKnown RBP24.76■■□□□ 1.55
TRAPPC11-203ENST00000504526 PARP1P09874 1014 aaKnown RBP24.76■■□□□ 1.55
TRAPPC11-203ENST00000504526 STOX1Q6ZVD7 989 aa24.76■■□□□ 1.55
TRAPPC11-203ENST00000504526 DPF3Q92784 378 aa24.76■■□□□ 1.55
TRAPPC11-203ENST00000504526 MTA3Q9BTC8 594 aa24.76■■□□□ 1.55
TRAPPC11-203ENST00000504526 WDR19Q8NEZ3 1342 aa24.76■■□□□ 1.55
TRAPPC11-203ENST00000504526 PLXNA1Q9UIW2 1896 aa24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 POTEB2H3BUK9 544 aa24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 GOLGA8HP0CJ92 632 aa24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 MNX1P50219 401 aaPredicted RBP24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 DIS3LQ8TF46 1054 aaKnown RBP24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 C11orf49Q9H6J7 331 aa24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 PPP4R2Q9NY27 417 aa24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 TAF6LQ9Y6J9 622 aa24.75■■□□□ 1.55
TRAPPC11-203ENST00000504526 WTAPQ15007 396 aa24.74■■□□□ 1.55
TRAPPC11-203ENST00000504526 NECTIN1Q15223 517 aa24.74■■□□□ 1.55
TRAPPC11-203ENST00000504526 PRAMEF19Q5SWL8 479 aa24.74■■□□□ 1.55
TRAPPC11-203ENST00000504526 RNF20Q5VTR2 975 aa24.74■■□□□ 1.55
TRAPPC11-203ENST00000504526 MB21D2Q8IYB1 491 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC11-203ENST00000504526 SLC27A2O14975 620 aa24.73■■□□□ 1.55
TRAPPC11-203ENST00000504526 MUM1L1Q5H9M0 696 aa24.73■■□□□ 1.55
TRAPPC11-203ENST00000504526 CREB3L3Q68CJ9 461 aa24.73■■□□□ 1.55
TRAPPC11-203ENST00000504526 FAM133AQ8N9E0 248 aa24.73■■□□□ 1.55
TRAPPC11-203ENST00000504526 UBA5Q9GZZ9 404 aa24.73■■□□□ 1.55
TRAPPC11-203ENST00000504526 AKR1A1P14550 325 aa24.72■■□□□ 1.55
TRAPPC11-203ENST00000504526 ARRDC4Q8NCT1 418 aa24.72■■□□□ 1.55
TRAPPC11-203ENST00000504526 CYP39A1Q9NYL5 469 aa24.72■■□□□ 1.55
TRAPPC11-203ENST00000504526 ASB14A6NK59 587 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 SNAI1O95863 264 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 ZNF865P0CJ78 1059 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 MCM5P33992 734 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 TMEM67Q5HYA8 995 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 NSMFQ6X4W1 530 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 ADGRF4Q8IZF3 695 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 FGD4Q96M96 766 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 ABHD16BQ9H3Z7 469 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 NR2E3Q9Y5X4 410 aa24.71■■□□□ 1.55
TRAPPC11-203ENST00000504526 DNM1LO00429 736 aa24.7■■□□□ 1.54
TRAPPC11-203ENST00000504526 RARBP10826 455 aa24.7■■□□□ 1.54
TRAPPC11-203ENST00000504526 COL6A1P12109 1028 aa24.7■■□□□ 1.54
TRAPPC11-203ENST00000504526 ANTXR2P58335 489 aa24.7■■□□□ 1.54
TRAPPC11-203ENST00000504526 CNTN2Q02246 1040 aa24.7■■□□□ 1.54
TRAPPC11-203ENST00000504526 CDC37Q16543 378 aaPredicted RBP24.7■■□□□ 1.54
TRAPPC11-203ENST00000504526 MAF1Q9H063 256 aa24.7■■□□□ 1.54
TRAPPC11-203ENST00000504526 DHX16O60231 1041 aaKnown RBP24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 EVI5O60447 810 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 TAL1P17542 331 aaPredicted RBP24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 ARMCX2Q7L311 632 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 CHST3Q7LGC8 479 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 CATIPQ7Z7H3 387 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 IGDCC4Q8TDY8 1250 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms