RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 SLC16A2P36021 539 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 RCAN1P53805 252 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 EVCP57679 992 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 Q3C1V9 767 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 SYDE2Q5VT97 1194 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 APOA5Q6Q788 366 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 SYNE3Q6ZMZ3 975 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 SLC38A10Q9HBR0 1119 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 BRPF3Q9ULD4 1205 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 MCM3APO60318 1980 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 KIF5BP33176 963 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 GNAQP50148 359 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 OAZ1P54368 228 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 CCNA1P78396 465 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 TOB2Q14106 344 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 KIF22Q14807 665 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 ARHGEF6Q15052 776 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 BRF1Q92994 677 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 TBC1D32Q96NH3 1257 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 KIF2CQ99661 725 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 SPATC1LQ9H0A9 340 aa13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 RANBP17Q9H2T7 1088 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-208ENST00000504489 LCTP09848 1927 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 ZBTB43O43298 467 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 PEX10O60683 326 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 SMARCA1P28370 1054 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 STAT3P40763 770 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 APOBRQ0VD83 1088 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 PPP2R5BQ15173 497 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 IER5LQ5T953 404 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 SHCBP1Q8NEM2 672 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 CD99L2Q8TCZ2 262 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 LZTS2Q9BRK4 669 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-208ENST00000504489 NID2Q14112 1375 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 SLC25A27O95847 323 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 GNRH1P01148 92 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 CTGFP29279 349 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 MAPK4P31152 587 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 COPB2P35606 906 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 PSMC4P43686 418 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 NEK4P51957 841 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 FCGRTP55899 365 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 CAP1Q01518 475 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 PLS1Q14651 629 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 ANKRD1Q15327 319 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 IL27Q8NEV9 243 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 ZNF274Q96GC6 653 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 TEX13BQ9BXU2 312 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 ARHGAP39Q9C0H5 1083 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 PORCNQ9H237 461 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 CPVLQ9H3G5 476 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 RIOX1Q9H6W3 641 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 PNMA2Q9UL42 364 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 ZNF536O15090 1300 aa13.85□□□□□ -0.19
PDLIM5-208ENST00000504489 RXRAP19793 462 aa13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 RTN1Q16799 776 aa13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 CCAR1Q8IX12 1150 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 CPXCR1Q8N123 301 aa13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 MTMR8Q96EF0 704 aa13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 SPZ1Q9BXG8 430 aa13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 MROH8Q9H579 483 aa13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 JMJD4Q9H9V9 463 aa13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 RBM28Q9NW13 759 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-208ENST00000504489 CCDC196A0A1B0GTZ2 297 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 GOLGA8BA8MQT2 603 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 CYTH3O43739 400 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 FMNL1O95466 1100 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 ICAM1P05362 532 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 ERCC3P19447 782 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 HOXD10P28358 340 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 PDIA3P30101 505 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 AK2P54819 239 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 SNAP25P60880 206 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 RABEP1Q15276 862 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 SLC35G1Q2M3R5 365 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 TKFCQ3LXA3 575 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 SNRNP48Q6IEG0 339 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
PDLIM5-208ENST00000504489 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms