RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ATP2B2Q01814 1243 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 ZNF761Q86XN6 746 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 LGI4Q8N135 537 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 CHFRQ96EP1 664 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 C1orf115Q9H7X2 142 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 ACSL6Q9UKU0 697 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 GPR55Q9Y2T6 319 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 PCDHB5Q9Y5E4 795 aa4.15□□□□□ -1.75
HMGB3P17-201ENST00000504195 UPK3BL1B0FP48 263 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 UPK3BL2E5RIL1 263 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 RNF4P78317 190 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 KIR3DS1Q14943 382 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 CSRP2Q16527 193 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 BORAQ6PGQ7 559 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 FAM124AQ86V42 546 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 DNAJC10Q8IXB1 793 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 RNF38Q9H0F5 515 aa4.14□□□□□ -1.75
HMGB3P17-201ENST00000504195 PCSK5Q92824 1860 aa4.13□□□□□ -1.75
HMGB3P17-201ENST00000504195 KIAA2012Q0VF49 1180 aa4.13□□□□□ -1.75
HMGB3P17-201ENST00000504195 CCDC85BQ15834 202 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P17-201ENST00000504195 TTLL7Q6ZT98 887 aa4.13□□□□□ -1.75
HMGB3P17-201ENST00000504195 LIMS2Q7Z4I7 341 aa4.13□□□□□ -1.75
HMGB3P17-201ENST00000504195 CCDC84Q86UT8 332 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P17-201ENST00000504195 DEF6Q9H4E7 631 aa4.13□□□□□ -1.75
HMGB3P17-201ENST00000504195 A0A1W2PQ27 194 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 A0A1W2PQ64 194 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 A0A1W2PQC6 194 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 A0A1W2PQD8 194 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 SYPP08247 313 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 MAPK8P45983 427 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 LIG3P49916 1009 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 DLX2Q07687 328 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 PDE4CQ08493 712 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 ZNF585AQ6P3V2 769 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 CEP89Q96ST8 783 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 INVSQ9Y283 1065 aa4.12□□□□□ -1.75
HMGB3P17-201ENST00000504195 SOWAHDA6NJG2 315 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 BPNT1O95861 308 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 NCAM1P13591 858 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 ATF2P15336 505 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 MAPK1P28482 360 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 GBP1P32455 592 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 FMR1Q06787 632 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 ABHD18Q0P651 414 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 BBS9Q3SYG4 887 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 PAQR3Q6TCH7 311 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 C14orf37Q86TY3 774 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 SLCO6A1Q86UG4 719 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 ZSCAN29Q8IWY8 852 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 PHACTR4Q8IZ21 702 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 ADAMTS17Q8TE56 1095 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 CRAMP1Q96RY5 1269 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 SSBP3Q9BWW4 388 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 TCAF1Q9Y4C2 921 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 PRR36Q9H6K5 1346 aa4.11□□□□□ -1.75
HMGB3P17-201ENST00000504195 A0A1W2PQJ5 194 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 MUSKO15146 869 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 SRGAP3O43295 1099 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 CYBBP04839 570 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 ICAM4Q14773 271 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 RGL3Q3MIN7 710 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 ZPBP2Q6X784 338 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 AEBP1Q8IUX7 1158 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 BIN2Q9UBW5 565 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 CORINQ9Y5Q5 1042 aa4.1□□□□□ -1.75
HMGB3P17-201ENST00000504195 NPIPB8E9PQR5 432 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 RGS13O14921 159 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 SMARCA5O60264 1052 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 TFE3P19532 575 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 EIF4BP23588 611 aaKnown RBP4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 MC3RP41968 323 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 SELENOPP49908 381 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 RAD51AP2Q09MP3 1159 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 MLECQ14165 292 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 SURF1Q15526 300 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 JARID2Q92833 1246 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 IMPACTQ9P2X3 320 aa4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 DBR1Q9UK59 544 aaKnown RBP4.09□□□□□ -1.75
HMGB3P17-201ENST00000504195 SIGLEC6O43699 453 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 NBPF9Q3BBW0 867 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 SPDYAQ5MJ70 313 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 LRCH2Q5VUJ6 765 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 B3GNT8Q7Z7M8 397 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 RETREG2Q8NC44 543 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 SEMA4AQ9H3S1 761 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 ERVK13-1Q9NX77 482 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 REV1Q9UBZ9 1251 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 KLHL3Q9UH77 587 aa4.08□□□□□ -1.76
HMGB3P17-201ENST00000504195 CHURC1-FNTBB4DL54 471 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 LAMTOR5O43504 91 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 BMP8BP34820 402 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 HLA-DQA1Q5Y7H0 255 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 DPY19L2P1Q6NXN4 242 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 ALG3Q92685 438 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 ZG16BQ96DA0 208 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 KIF2CQ99661 725 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 IKZF4Q9H2S9 585 aa4.07□□□□□ -1.76
HMGB3P17-201ENST00000504195 NPEPPSL1A6NEC2 478 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 MROH6A6NGR9 719 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms