RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 PCSK9Q8NBP7 692 aaKnown RBP27.31■■□□□ 1.96
SSBP2-203ENST00000504174 RNPC3Q96LT9 517 aaKnown RBP27.31■■□□□ 1.96
SSBP2-203ENST00000504174 GLT1D1Q96MS3 346 aa27.31■■□□□ 1.96
SSBP2-203ENST00000504174 HOMER2Q9NSB8 354 aa27.31■■□□□ 1.96
SSBP2-203ENST00000504174 C6orf222P0C671 652 aaPredicted RBP27.3■■□□□ 1.96
SSBP2-203ENST00000504174 MX1P20591 662 aa27.3■■□□□ 1.96
SSBP2-203ENST00000504174 ITGB8P26012 769 aa27.3■■□□□ 1.96
SSBP2-203ENST00000504174 SLC1A4P43007 532 aa27.3■■□□□ 1.96
SSBP2-203ENST00000504174 FPGSQ05932 587 aa27.3■■□□□ 1.96
SSBP2-203ENST00000504174 ACAD9Q9H845 621 aa27.3■■□□□ 1.96
SSBP2-203ENST00000504174 MROH7Q68CQ1 1323 aa27.3■■□□□ 1.96
SSBP2-203ENST00000504174 CST5P28325 142 aaPredicted RBP27.29■■□□□ 1.96
SSBP2-203ENST00000504174 FAAP100Q0VG06 881 aa27.29■■□□□ 1.96
SSBP2-203ENST00000504174 CCDC144BQ3MJ40 725 aa27.29■■□□□ 1.96
SSBP2-203ENST00000504174 ARMCX2Q7L311 632 aa27.29■■□□□ 1.96
SSBP2-203ENST00000504174 GMCL1Q96IK5 515 aa27.29■■□□□ 1.96
SSBP2-203ENST00000504174 PCDHB15Q9Y5E8 787 aa27.29■■□□□ 1.96
SSBP2-203ENST00000504174 ELP1O95163 1332 aa27.28■■□□□ 1.96
SSBP2-203ENST00000504174 TSPY2A6NKD2 308 aa27.28■■□□□ 1.96
SSBP2-203ENST00000504174 CCSAPQ6IQ19 270 aaPredicted RBP27.28■■□□□ 1.96
SSBP2-203ENST00000504174 OTUD7AQ8TE49 926 aaPredicted RBP27.28■■□□□ 1.96
SSBP2-203ENST00000504174 STAG1Q8WVM7 1258 aa27.28■■□□□ 1.96
SSBP2-203ENST00000504174 VTI1AQ96AJ9 217 aa27.28■■□□□ 1.96
SSBP2-203ENST00000504174 SEMA6BQ9H3T3 888 aa27.28■■□□□ 1.96
SSBP2-203ENST00000504174 STX8Q9UNK0 236 aa27.28■■□□□ 1.96
SSBP2-203ENST00000504174 TKFCQ3LXA3 575 aa27.27■■□□□ 1.96
SSBP2-203ENST00000504174 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.27■■□□□ 1.96
SSBP2-203ENST00000504174 CCDC144CPQ8IYA2 1237 aa27.27■■□□□ 1.96
SSBP2-203ENST00000504174 CDX2Q99626 313 aaPredicted RBP27.27■■□□□ 1.96
SSBP2-203ENST00000504174 MYADML2A6NDP7 307 aa27.26■■□□□ 1.95
SSBP2-203ENST00000504174 ASGR1P07306 291 aa27.26■■□□□ 1.95
SSBP2-203ENST00000504174 MCCP23508 829 aa27.26■■□□□ 1.95
SSBP2-203ENST00000504174 GJA9P57773 515 aa27.26■■□□□ 1.95
SSBP2-203ENST00000504174 FGD4Q96M96 766 aa27.26■■□□□ 1.95
SSBP2-203ENST00000504174 UPF3AQ9H1J1 476 aaKnown RBP27.26■■□□□ 1.95
SSBP2-203ENST00000504174 RNF146Q9NTX7 359 aa27.26■■□□□ 1.95
SSBP2-203ENST00000504174 MCM3APO60318 1980 aa27.26■■□□□ 1.95
SSBP2-203ENST00000504174 GNASQ5JWF2 1037 aa27.25■■□□□ 1.95
SSBP2-203ENST00000504174 CHMP4CQ96CF2 233 aa27.25■■□□□ 1.95
SSBP2-203ENST00000504174 AGBL1Q96MI9 1066 aa27.25■■□□□ 1.95
SSBP2-203ENST00000504174 ASB14A6NK59 587 aa27.24■■□□□ 1.95
SSBP2-203ENST00000504174 PLA2G6O60733 806 aa27.24■■□□□ 1.95
SSBP2-203ENST00000504174 TIMP1P01033 207 aa27.24■■□□□ 1.95
SSBP2-203ENST00000504174 EPHB4P54760 987 aa27.24■■□□□ 1.95
SSBP2-203ENST00000504174 CNTN2Q02246 1040 aa27.24■■□□□ 1.95
SSBP2-203ENST00000504174 CTDSPL2Q05D32 466 aa27.24■■□□□ 1.95
SSBP2-203ENST00000504174 RCSD1Q6JBY9 416 aa27.24■■□□□ 1.95
SSBP2-203ENST00000504174 A1CFQ9NQ94 594 aaKnown RBP27.24■■□□□ 1.95
SSBP2-203ENST00000504174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.24■■□□□ 1.95
SSBP2-203ENST00000504174 TMEM265A0A087WTH1 108 aa27.23■■□□□ 1.95
SSBP2-203ENST00000504174 A0A0U1RQG5 324 aaPredicted RBP27.23■■□□□ 1.95
SSBP2-203ENST00000504174 ADCY6O43306 1168 aa27.23■■□□□ 1.95
SSBP2-203ENST00000504174 ALAS1P13196 640 aa27.23■■□□□ 1.95
SSBP2-203ENST00000504174 CCDC129Q6ZRS4 1044 aa27.23■■□□□ 1.95
SSBP2-203ENST00000504174 NOL8Q76FK4 1167 aaKnown RBP27.23■■□□□ 1.95
SSBP2-203ENST00000504174 FAM133AQ8N9E0 248 aa27.23■■□□□ 1.95
SSBP2-203ENST00000504174 TRERF1Q96PN7 1200 aa27.23■■□□□ 1.95
SSBP2-203ENST00000504174 ZNF536O15090 1300 aa27.22■■□□□ 1.95
SSBP2-203ENST00000504174 TLR3O15455 904 aaKnown RBP27.22■■□□□ 1.95
SSBP2-203ENST00000504174 RANBP6O60518 1105 aaKnown RBP27.22■■□□□ 1.95
SSBP2-203ENST00000504174 TNFAIP2Q03169 654 aa27.22■■□□□ 1.95
SSBP2-203ENST00000504174 CCDC174Q6PII3 467 aa27.22■■□□□ 1.95
SSBP2-203ENST00000504174 KCTD1Q719H9 257 aa27.22■■□□□ 1.95
SSBP2-203ENST00000504174 LAMA2P24043 3122 aaKnown RBP27.22■■□□□ 1.95
SSBP2-203ENST00000504174 ARVCFO00192 962 aa27.21■■□□□ 1.95
SSBP2-203ENST00000504174 CDK7P50613 346 aa27.21■■□□□ 1.95
SSBP2-203ENST00000504174 IRX5P78411 483 aaPredicted RBP27.21■■□□□ 1.95
SSBP2-203ENST00000504174 ANKRD45Q5TZF3 282 aa27.21■■□□□ 1.95
SSBP2-203ENST00000504174 EVI5LQ96CN4 794 aa27.21■■□□□ 1.95
SSBP2-203ENST00000504174 KATNBL1Q9H079 304 aa27.21■■□□□ 1.95
SSBP2-203ENST00000504174 TTYH1Q9H313 450 aaPredicted RBP27.21■■□□□ 1.95
SSBP2-203ENST00000504174 TBX21Q9UL17 535 aa27.21■■□□□ 1.95
SSBP2-203ENST00000504174 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.2■■□□□ 1.94
SSBP2-203ENST00000504174 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.2■■□□□ 1.94
SSBP2-203ENST00000504174 PPIGQ13427 754 aaKnown RBP eCLIP27.2■■□□□ 1.94
SSBP2-203ENST00000504174 MFSD5Q6N075 450 aa27.2■■□□□ 1.94
SSBP2-203ENST00000504174 MAFAQ8NHW3 353 aaPredicted RBP27.2■■□□□ 1.94
SSBP2-203ENST00000504174 MYLIPQ8WY64 445 aa27.2■■□□□ 1.94
SSBP2-203ENST00000504174 IL17RBQ9NRM6 502 aa27.2■■□□□ 1.94
SSBP2-203ENST00000504174 ANAPC4Q9UJX5 808 aa27.2■■□□□ 1.94
SSBP2-203ENST00000504174 PRR12Q9ULL5 1215 aa27.2■■□□□ 1.94
SSBP2-203ENST00000504174 MTMR7Q9Y216 660 aa27.2■■□□□ 1.94
SSBP2-203ENST00000504174 SALL3Q9BXA9 1300 aa27.19■■□□□ 1.94
SSBP2-203ENST00000504174 SOWAHBA6NEL2 793 aa27.19■■□□□ 1.94
SSBP2-203ENST00000504174 NMT2O60551 498 aa27.19■■□□□ 1.94
SSBP2-203ENST00000504174 TMEM199Q8N511 208 aa27.19■■□□□ 1.94
SSBP2-203ENST00000504174 INCENPQ9NQS7 918 aa27.19■■□□□ 1.94
SSBP2-203ENST00000504174 HELLSQ9NRZ9 838 aa27.19■■□□□ 1.94
SSBP2-203ENST00000504174 FOXP2O15409 715 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 FOSL2P15408 326 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 NKX3-2P78367 333 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 CCDC96Q2M329 555 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 DCAF4Q8WV16 495 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 AP5M1Q9H0R1 490 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 TOMM22Q9NS69 142 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 CCPG1Q9ULG6 757 aa27.18■■□□□ 1.94
SSBP2-203ENST00000504174 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.17■■□□□ 1.94
SSBP2-203ENST00000504174 ORC4O43929 436 aa27.17■■□□□ 1.94
SSBP2-203ENST00000504174 ZEB2O60315 1214 aa27.17■■□□□ 1.94
SSBP2-203ENST00000504174 CABYRO75952 493 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms