RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 AP5S1Q9NUS5 200 aa6.82□□□□□ -1.32
SUB1-204ENST00000504016 ERVK13-1Q9NX77 482 aa6.82□□□□□ -1.32
SUB1-204ENST00000504016 KLHL14Q9P2G3 628 aa6.82□□□□□ -1.32
SUB1-204ENST00000504016 A0A1W2PQ45 241 aaPredicted RBP6.81□□□□□ -1.32
SUB1-204ENST00000504016 A0A1W2PQY0 241 aa6.81□□□□□ -1.32
SUB1-204ENST00000504016 TMEM62Q0P6H9 643 aa6.81□□□□□ -1.32
SUB1-204ENST00000504016 CRTC3Q6UUV7 619 aa6.81□□□□□ -1.32
SUB1-204ENST00000504016 SLCO6A1Q86UG4 719 aa6.81□□□□□ -1.32
SUB1-204ENST00000504016 KIAA0825Q8IV33 1275 aa6.81□□□□□ -1.32
SUB1-204ENST00000504016 NUP43Q8NFH3 380 aa6.81□□□□□ -1.32
SUB1-204ENST00000504016 MZB1Q8WU39 189 aa6.81□□□□□ -1.32
SUB1-204ENST00000504016 DACT3Q96B18 629 aaPredicted RBP6.81□□□□□ -1.32
SUB1-204ENST00000504016 EAF1Q96JC9 268 aaPredicted RBP6.81□□□□□ -1.32
SUB1-204ENST00000504016 NUDT19A8MXV4 375 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 SASH1O94885 1247 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 GSNP06396 782 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 ZNF76P36508 570 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 CDR1P51861 262 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 INTS3Q68E01 1043 aaKnown RBP6.8□□□□□ -1.32
SUB1-204ENST00000504016 TMC6Q7Z403 805 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 CCDC144CPQ8IYA2 1237 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 PRR13Q9NZ81 148 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
SUB1-204ENST00000504016 PCDHGB7Q9Y5F8 929 aa6.8□□□□□ -1.32
SUB1-204ENST00000504016 A0A0G2JLL6 359 aaPredicted RBP6.79□□□□□ -1.32
SUB1-204ENST00000504016 A0A1W2PQ27 194 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 A0A1W2PQ64 194 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 A0A1W2PQC6 194 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 A0A1W2PQD8 194 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 FANCCQ00597 558 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 ZNF394Q53GI3 561 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 CWF19L1Q69YN2 538 aaKnown RBP6.79□□□□□ -1.32
SUB1-204ENST00000504016 CNKSR3Q6P9H4 555 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 LDHDQ86WU2 507 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 NAT16Q8N8M0 369 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 IMPACTQ9P2X3 320 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 ACSL6Q9UKU0 697 aa6.79□□□□□ -1.32
SUB1-204ENST00000504016 C9IYK1 514 aa6.78□□□□□ -1.32
SUB1-204ENST00000504016 IRS4O14654 1257 aaPredicted RBP6.78□□□□□ -1.32
SUB1-204ENST00000504016 FOXD2O60548 495 aaPredicted RBP6.78□□□□□ -1.32
SUB1-204ENST00000504016 GSTM1P09488 218 aa6.78□□□□□ -1.32
SUB1-204ENST00000504016 NFIXQ14938 502 aa6.78□□□□□ -1.32
SUB1-204ENST00000504016 VMACQ2NL98 169 aa6.78□□□□□ -1.32
SUB1-204ENST00000504016 NOL9Q5SY16 702 aaKnown RBP6.78□□□□□ -1.32
SUB1-204ENST00000504016 TMEM52Q8NDY8 209 aa6.78□□□□□ -1.32
SUB1-204ENST00000504016 RNF34Q969K3 372 aa6.78□□□□□ -1.32
SUB1-204ENST00000504016 JMJD8Q96S16 334 aa6.78□□□□□ -1.32
SUB1-204ENST00000504016 EPB41L4AQ9HCS5 686 aaPredicted RBP6.78□□□□□ -1.32
SUB1-204ENST00000504016 SCAMP3O14828 347 aaKnown RBP6.77□□□□□ -1.33
SUB1-204ENST00000504016 ACRP10323 421 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 IMPDH2P12268 514 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 RTP2Q5QGT7 225 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 TDRD10Q5VZ19 366 aaKnown RBP6.77□□□□□ -1.33
SUB1-204ENST00000504016 HLA-DQA1Q5Y7H0 255 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 JAMLQ86YT9 394 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 TMEFF1Q8IYR6 380 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 TNFRSF12AQ9NP84 129 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 ZNRF3Q9ULT6 936 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 ADAMTS20P59510 1910 aa6.77□□□□□ -1.33
SUB1-204ENST00000504016 CEBPAP49715 358 aaPredicted RBP6.76□□□□□ -1.33
SUB1-204ENST00000504016 PMS1P54277 932 aaKnown RBP6.76□□□□□ -1.33
SUB1-204ENST00000504016 NCKAP1LP55160 1127 aa6.76□□□□□ -1.33
SUB1-204ENST00000504016 HDLBPQ00341 1268 aaKnown RBP6.76□□□□□ -1.33
SUB1-204ENST00000504016 FBXW10Q5XX13 1052 aa6.76□□□□□ -1.33
SUB1-204ENST00000504016 RPTNQ6XPR3 784 aa6.76□□□□□ -1.33
SUB1-204ENST00000504016 USP48Q86UV5 1035 aa6.76□□□□□ -1.33
SUB1-204ENST00000504016 FAM129CQ86XR2 697 aa6.76□□□□□ -1.33
SUB1-204ENST00000504016 IGDCC3Q8IVU1 814 aa6.76□□□□□ -1.33
SUB1-204ENST00000504016 SMARCC1Q92922 1105 aaPredicted RBP6.76□□□□□ -1.33
SUB1-204ENST00000504016 SLC12A9Q9BXP2 914 aa6.76□□□□□ -1.33
SUB1-204ENST00000504016 A0A1W2PQJ5 194 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 OTOL1A6NHN0 477 aaPredicted RBP6.75□□□□□ -1.33
SUB1-204ENST00000504016 SHOXO15266 292 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 BUB1BO60566 1050 aaPredicted RBP6.75□□□□□ -1.33
SUB1-204ENST00000504016 SYN1P17600 705 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 VAMP1P23763 118 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 MVKQ03426 396 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 CBX2Q14781 532 aaPredicted RBP6.75□□□□□ -1.33
SUB1-204ENST00000504016 NR1I3Q14994 352 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 DCAF15Q66K64 600 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 BRF1Q92994 677 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 PWWP2AQ96N64 755 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 XYLT2Q9H1B5 865 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 PCDHA5Q9Y5H7 936 aa6.75□□□□□ -1.33
SUB1-204ENST00000504016 H0Y8X5 98 aa6.74□□□□□ -1.33
SUB1-204ENST00000504016 TP53P04637 393 aaPredicted RBP6.74□□□□□ -1.33
SUB1-204ENST00000504016 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
SUB1-204ENST00000504016 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
SUB1-204ENST00000504016 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
SUB1-204ENST00000504016 ZC3H14Q6PJT7 736 aaKnown RBP6.74□□□□□ -1.33
SUB1-204ENST00000504016 NT5DC4Q86YG4 428 aa6.74□□□□□ -1.33
SUB1-204ENST00000504016 TAB3Q8N5C8 712 aaPredicted RBP6.74□□□□□ -1.33
SUB1-204ENST00000504016 FEZF2Q8TBJ5 459 aa6.74□□□□□ -1.33
SUB1-204ENST00000504016 TM9SF2Q99805 663 aa6.74□□□□□ -1.33
SUB1-204ENST00000504016 GP6Q9HCN6 339 aa6.74□□□□□ -1.33
SUB1-204ENST00000504016 FAM86C1Q9NVL1 165 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms