RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 SYNRGQ9UMZ2 1314 aa25.45■■□□□ 1.67
PCDH1-204ENST00000503492 hCG_1984214I3L0E3 225 aa25.45■■□□□ 1.66
PCDH1-204ENST00000503492 GTF2F1P35269 517 aaKnown RBP eCLIP25.45■■□□□ 1.66
PCDH1-204ENST00000503492 ZNF543Q08ER8 600 aa25.45■■□□□ 1.66
PCDH1-204ENST00000503492 NAALADL2Q58DX5 795 aa25.45■■□□□ 1.66
PCDH1-204ENST00000503492 ZNF713Q8N859 430 aaPredicted RBP25.45■■□□□ 1.66
PCDH1-204ENST00000503492 COA7Q96BR5 231 aa25.45■■□□□ 1.66
PCDH1-204ENST00000503492 TRMT1Q9NXH9 659 aaKnown RBP25.45■■□□□ 1.66
PCDH1-204ENST00000503492 RGPD3A6NKT7 1758 aaPredicted RBP25.45■■□□□ 1.66
PCDH1-204ENST00000503492 RGPD4Q7Z3J3 1758 aa25.45■■□□□ 1.66
PCDH1-204ENST00000503492 MPHOSPH10O00566 681 aaKnown RBP25.45■■□□□ 1.66
PCDH1-204ENST00000503492 CCNT1O60563 726 aaKnown RBP25.45■■□□□ 1.66
PCDH1-204ENST00000503492 NEK8Q86SG6 692 aa25.45■■□□□ 1.66
PCDH1-204ENST00000503492 TMEM260Q9NX78 707 aa25.45■■□□□ 1.66
PCDH1-204ENST00000503492 RIOK3O14730 519 aaKnown RBP25.44■■□□□ 1.66
PCDH1-204ENST00000503492 TCP10Q12799 353 aa25.44■■□□□ 1.66
PCDH1-204ENST00000503492 JAKMIP3Q5VZ66 844 aa25.44■■□□□ 1.66
PCDH1-204ENST00000503492 REXO1Q8N1G1 1221 aaKnown RBP25.44■■□□□ 1.66
PCDH1-204ENST00000503492 TBCKQ8TEA7 893 aa25.44■■□□□ 1.66
PCDH1-204ENST00000503492 CCSER1Q9C0I3 900 aa25.44■■□□□ 1.66
PCDH1-204ENST00000503492 SIPA1L1O43166 1804 aa25.44■■□□□ 1.66
PCDH1-204ENST00000503492 E4F1Q66K89 784 aaPredicted RBP25.44■■□□□ 1.66
PCDH1-204ENST00000503492 NYAP1Q6ZVC0 841 aa25.44■■□□□ 1.66
PCDH1-204ENST00000503492 C7orf43Q8WVR3 580 aa25.44■■□□□ 1.66
PCDH1-204ENST00000503492 RBM5P52756 815 aaKnown RBP eCLIP25.43■■□□□ 1.66
PCDH1-204ENST00000503492 HDLBPQ00341 1268 aaKnown RBP25.43■■□□□ 1.66
PCDH1-204ENST00000503492 SLC15A2Q16348 729 aa25.43■■□□□ 1.66
PCDH1-204ENST00000503492 CNKSR1Q969H4 720 aa25.43■■□□□ 1.66
PCDH1-204ENST00000503492 JMJD4Q9H9V9 463 aa25.43■■□□□ 1.66
PCDH1-204ENST00000503492 FAM198AQ9UFP1 575 aa25.43■■□□□ 1.66
PCDH1-204ENST00000503492 DDTLA6NHG4 134 aaPredicted RBP25.42■■□□□ 1.66
PCDH1-204ENST00000503492 OR52Z1P0C646 297 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 UBA7P41226 1012 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 AOC3Q16853 763 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 RRAGBQ5VZM2 374 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 TTBK2Q6IQ55 1244 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 ADGRF4Q8IZF3 695 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 MYH4Q9Y623 1939 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 FAM196BA6NMK8 535 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 RPN1P04843 607 aaKnown RBP25.42■■□□□ 1.66
PCDH1-204ENST00000503492 ATP2B2Q01814 1243 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 GOLGA8FQ08AF8 430 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 GOLGA8DPQ0D2H9 430 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 TBX2Q13207 712 aaPredicted RBP25.42■■□□□ 1.66
PCDH1-204ENST00000503492 APTXQ7Z2E3 356 aaKnown RBP25.42■■□□□ 1.66
PCDH1-204ENST00000503492 CCDC17Q96LX7 622 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 IDI2Q9BXS1 227 aa25.42■■□□□ 1.66
PCDH1-204ENST00000503492 KCNJ6P48051 423 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 SH3BP5LQ7L8J4 393 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 TMX1Q9H3N1 280 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 CTNND2Q9UQB3 1225 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 NR1I3Q14994 352 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 EZH2Q15910 746 aaKnown RBP25.41■■□□□ 1.66
PCDH1-204ENST00000503492 CDKAL1Q5VV42 579 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 RASSF8Q8NHQ8 419 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 LRRC15Q8TF66 581 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 PLIN2Q99541 437 aa25.41■■□□□ 1.66
PCDH1-204ENST00000503492 DHX36Q9H2U1 1008 aaKnown RBP25.41■■□□□ 1.66
PCDH1-204ENST00000503492 A0A1B0GTH6 734 aa25.4■■□□□ 1.66
PCDH1-204ENST00000503492 ADCY7P51828 1080 aa25.4■■□□□ 1.66
PCDH1-204ENST00000503492 PTPN14Q15678 1187 aa25.4■■□□□ 1.66
PCDH1-204ENST00000503492 TSC1Q92574 1164 aa25.4■■□□□ 1.66
PCDH1-204ENST00000503492 PNMA6FA0A0J9YX94 578 aa25.4■■□□□ 1.66
PCDH1-204ENST00000503492 NRDCO43847 1150 aa25.4■■□□□ 1.66
PCDH1-204ENST00000503492 PPP1R11O60927 126 aaPredicted RBP25.4■■□□□ 1.66
PCDH1-204ENST00000503492 RBM10P98175 930 aaKnown RBP25.4■■□□□ 1.66
PCDH1-204ENST00000503492 SHROOM1Q2M3G4 852 aaPredicted RBP25.4■■□□□ 1.66
PCDH1-204ENST00000503492 ZNF658Q5TYW1 1059 aaPredicted RBP25.4■■□□□ 1.66
PCDH1-204ENST00000503492 CEP135Q66GS9 1140 aa25.4■■□□□ 1.66
PCDH1-204ENST00000503492 AK8Q96MA6 479 aa25.39■■□□□ 1.66
PCDH1-204ENST00000503492 RMND1Q9NWS8 449 aa25.39■■□□□ 1.66
PCDH1-204ENST00000503492 COBLO75128 1261 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 SLC16A2P36021 539 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 CCDC96Q2M329 555 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 GPATCH4Q5T3I0 446 aaKnown RBP25.39■■□□□ 1.65
PCDH1-204ENST00000503492 SPECC1LQ69YQ0 1117 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 KCTD1Q719H9 257 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 CCDC112Q8NEF3 446 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 PI4KBQ9UBF8 816 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 SERPINA10Q9UK55 444 aa25.39■■□□□ 1.65
PCDH1-204ENST00000503492 PSDA5PKW4 1024 aaPredicted RBP25.38■■□□□ 1.65
PCDH1-204ENST00000503492 EDIL3O43854 480 aa25.38■■□□□ 1.65
PCDH1-204ENST00000503492 EN1Q05925 392 aaPredicted RBP25.38■■□□□ 1.65
PCDH1-204ENST00000503492 ORC2Q13416 577 aaPredicted RBP25.38■■□□□ 1.65
PCDH1-204ENST00000503492 CABP7Q86V35 215 aa25.38■■□□□ 1.65
PCDH1-204ENST00000503492 POTEDQ86YR6 584 aa25.38■■□□□ 1.65
PCDH1-204ENST00000503492 KBTBD4Q9NVX7 518 aa25.38■■□□□ 1.65
PCDH1-204ENST00000503492 GDAQ9Y2T3 454 aa25.38■■□□□ 1.65
PCDH1-204ENST00000503492 ZSCAN29Q8IWY8 852 aaPredicted RBP25.37■■□□□ 1.65
PCDH1-204ENST00000503492 PPP1R13BQ96KQ4 1090 aa25.37■■□□□ 1.65
PCDH1-204ENST00000503492 CAMKK2Q96RR4 588 aa25.37■■□□□ 1.65
PCDH1-204ENST00000503492 RWDD2AQ9UIY3 292 aa25.37■■□□□ 1.65
PCDH1-204ENST00000503492 PAXBP1Q9Y5B6 917 aa25.37■■□□□ 1.65
PCDH1-204ENST00000503492 TEX33O43247 280 aa25.37■■□□□ 1.65
PCDH1-204ENST00000503492 CERKLQ49MI3 558 aaPredicted RBP25.37■■□□□ 1.65
PCDH1-204ENST00000503492 PPP1R18Q6NYC8 613 aa25.37■■□□□ 1.65
PCDH1-204ENST00000503492 TMEM139Q8IV31 216 aa25.37■■□□□ 1.65
PCDH1-204ENST00000503492 USP17L10C9JJH3 530 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 PLCG1P19174 1290 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 TECP42680 631 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms