RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PDRG1Q9NUG6 133 aa19.22■□□□□ 0.67
SCLT1-205ENST00000503401 TOB2Q14106 344 aaPredicted RBP19.21■□□□□ 0.67
SCLT1-205ENST00000503401 SYNE3Q6ZMZ3 975 aa19.21■□□□□ 0.67
SCLT1-205ENST00000503401 PLEKHH3Q7Z736 793 aa19.21■□□□□ 0.67
SCLT1-205ENST00000503401 AGXT2Q9BYV1 514 aa19.21■□□□□ 0.67
SCLT1-205ENST00000503401 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
SCLT1-205ENST00000503401 SRRDQ9UH36 339 aa19.21■□□□□ 0.67
SCLT1-205ENST00000503401 ATP2A1O14983 1001 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 ZBTB43O43298 467 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 PLEKHA8P1O95397 391 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 FDX1P10109 184 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 FANCBQ8NB91 859 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 IL17RAQ96F46 866 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 MCOLN1Q9GZU1 580 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 JMJD4Q9H9V9 463 aa19.2■□□□□ 0.66
SCLT1-205ENST00000503401 CYTH3O43739 400 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 SLC25A27O95847 323 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 GNRH1P01148 92 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 CALM1P0DP23 149 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 CALM2P0DP24 149 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 CALM3P0DP25 149 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 HOXD10P28358 340 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 FLT3LGP49771 235 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 OAZ1P54368 228 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 CDC37Q16543 378 aaPredicted RBP19.19■□□□□ 0.66
SCLT1-205ENST00000503401 FBXL16Q8N461 479 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 SHCBP1Q8NEM2 672 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 PIBF1Q8WXW3 757 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 MAP3K14Q99558 947 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 CCPG1Q9ULG6 757 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 PTPN22Q9Y2R2 807 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 PTCH2Q9Y6C5 1203 aa19.19■□□□□ 0.66
SCLT1-205ENST00000503401 GOLGA8BA8MQT2 603 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 ALAS1P13196 640 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 KIF5BP33176 963 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 HOMER1Q86YM7 354 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 CCDC82Q8N4S0 544 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 KIF2CQ99661 725 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 MROH8Q9H579 483 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
SCLT1-205ENST00000503401 GJD2Q9UKL4 321 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 IVNS1ABPQ9Y6Y0 642 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 GOLGA8AA7E2F4 631 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 ICAM1P05362 532 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 PTPREP23469 700 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
SCLT1-205ENST00000503401 RTN1Q16799 776 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 USH1GQ495M9 461 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 SRBD1Q8N5C6 995 aaKnown RBP19.18■□□□□ 0.66
SCLT1-205ENST00000503401 HPS5Q9UPZ3 1129 aa19.18■□□□□ 0.66
SCLT1-205ENST00000503401 CYP2B6P20813 491 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 NEK4P51957 841 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 QRICH1Q2TAL8 776 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 MORN1Q5T089 497 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 FBXO46Q6PJ61 603 aaPredicted RBP19.17■□□□□ 0.66
SCLT1-205ENST00000503401 RAET1EQ8TD07 263 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 PIGSQ96S52 555 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 NUDT12Q9BQG2 462 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 RNF146Q9NTX7 359 aa19.17■□□□□ 0.66
SCLT1-205ENST00000503401 CDC27P30260 824 aa19.16■□□□□ 0.66
SCLT1-205ENST00000503401 METAP2P50579 478 aaKnown RBP eCLIP19.16■□□□□ 0.66
SCLT1-205ENST00000503401 GRB14Q14449 540 aa19.16■□□□□ 0.66
SCLT1-205ENST00000503401 MUM1L1Q5H9M0 696 aa19.16■□□□□ 0.66
SCLT1-205ENST00000503401 NOL8Q76FK4 1167 aaKnown RBP19.16■□□□□ 0.66
SCLT1-205ENST00000503401 TRERF1Q96PN7 1200 aa19.16■□□□□ 0.66
SCLT1-205ENST00000503401 MMP19Q99542 508 aa19.16■□□□□ 0.66
SCLT1-205ENST00000503401 RIOX1Q9H6W3 641 aa19.16■□□□□ 0.66
SCLT1-205ENST00000503401 FAM217BQ9NTX9 383 aaPredicted RBP19.16■□□□□ 0.66
SCLT1-205ENST00000503401 FCER1AP12319 257 aa19.15■□□□□ 0.66
SCLT1-205ENST00000503401 ADORA2AP29274 412 aa19.15■□□□□ 0.66
SCLT1-205ENST00000503401 AK2P54819 239 aa19.15■□□□□ 0.66
SCLT1-205ENST00000503401 PKN2Q16513 984 aaKnown RBP19.15■□□□□ 0.66
SCLT1-205ENST00000503401 TMTC3Q6ZXV5 915 aa19.15■□□□□ 0.66
SCLT1-205ENST00000503401 SOCS4Q8WXH5 440 aa19.15■□□□□ 0.66
SCLT1-205ENST00000503401 MTMR8Q96EF0 704 aa19.15■□□□□ 0.66
SCLT1-205ENST00000503401 PLXNA1Q9UIW2 1896 aa19.15■□□□□ 0.66
SCLT1-205ENST00000503401 hCG_1642624A0A1W2PR95 340 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 SLC15A5A6NIM6 579 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 PPP1R11O60927 126 aaPredicted RBP19.14■□□□□ 0.66
SCLT1-205ENST00000503401 PGK2P07205 417 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 ELNP15502 786 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 PDIA3P30101 505 aaKnown RBP19.14■□□□□ 0.66
SCLT1-205ENST00000503401 COPB2P35606 906 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 ADD1P35611 737 aaKnown RBP19.14■□□□□ 0.66
SCLT1-205ENST00000503401 GNAQP50148 359 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 PRMT2P55345 433 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 EVCP57679 992 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 CCT2P78371 535 aaKnown RBP19.14■□□□□ 0.66
SCLT1-205ENST00000503401 USP6NLQ92738 828 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 TBC1D32Q96NH3 1257 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 ACAD9Q9H845 621 aa19.14■□□□□ 0.66
SCLT1-205ENST00000503401 NCOA5Q9HCD5 579 aaKnown RBP19.14■□□□□ 0.66
SCLT1-205ENST00000503401 ZBTB5O15062 677 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 STRNO43815 780 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 COBLO75128 1261 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 MAP2K5Q13163 448 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 STK3Q13188 491 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 CHST13Q8NET6 341 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 SH3TC2Q8TF17 1288 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 SPZ1Q9BXG8 430 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms