RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 BICDL1Q6ZP65 573 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 NOP9Q86U38 636 aaKnown RBP7.28□□□□□ -1.24
CLCN3-203ENST00000502998 C11orf74Q86VG3 221 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 BPHLQ86WA6 291 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-203ENST00000502998 ESX1Q8N693 406 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 CEP112Q8N8E3 955 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 CCDC89Q8N998 374 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 WDR66Q8TBY9 1149 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 CCDC110Q8TBZ0 833 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 CTAGE1Q96RT6 745 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 TESK2Q96S53 571 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 TTC12Q9H892 705 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-203ENST00000502998 CASS4Q9NQ75 786 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 PAPOLBQ9NRJ5 636 aaKnown RBP7.28□□□□□ -1.24
CLCN3-203ENST00000502998 STIM2Q9P246 746 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 TCEAL9Q9UHQ7 104 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 ADAM21Q9UKJ8 722 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 TMCO1Q9UM00 188 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 CEP131Q9UPN4 1083 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-203ENST00000502998 CCDC7Q96M83 1385 aa7.28□□□□□ -1.24
CLCN3-203ENST00000502998 TTC34A8MYJ7 566 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 H0Y3Z8 333 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 H0YC42 278 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 NDUFAB1O14561 156 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 POLR3GO15318 223 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 NEMFO60524 1076 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 CAVIN2O95810 425 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 FOSP01100 380 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 TUBB4AP04350 444 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 PARP1P09874 1014 aaKnown RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 CCDC166P0CW27 439 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 HSPA8P11142 646 aaKnown RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 GNAT2P19087 354 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 ENDOUP21128 410 aaKnown RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 TSPAN7P41732 249 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 AMPHP49418 695 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 PEX5P50542 639 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 TPD52P55327 224 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 OXCT1P55809 520 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 SMC1AQ14683 1233 aaKnown RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 PLCB4Q15147 1175 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 VPS53Q5VIR6 699 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 POTEEQ6S8J3 1075 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 CWC27Q6UX04 472 aaKnown RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 TMEM92Q6UXU6 159 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 NCCRP1Q6ZVX7 275 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 BEND5Q7L4P6 421 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 APPL2Q8NEU8 664 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 RASSF8Q8NHQ8 419 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 FAM200AQ8TCP9 573 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 GIPC2Q8TF65 315 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 KAT2BQ92831 832 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 ATP6V0A1Q93050 837 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 HPS3Q969F9 1004 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 HVCN1Q96D96 273 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 C8orf76Q96K31 380 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 HAUS7Q99871 368 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 EIF2AQ9BY44 585 aaKnown RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 UPF3BQ9BZI7 483 aaKnown RBP7.27□□□□□ -1.25
CLCN3-203ENST00000502998 NLRP2Q9NX02 1062 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 STK39Q9UEW8 545 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 GTF3C4Q9UKN8 822 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 ASAP1Q9ULH1 1129 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 PRR12Q9ULL5 1215 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 ANKRD36BQ8N2N9 1353 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 SHANK3Q9BYB0 1731 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 TNS2Q63HR2 1409 aa7.27□□□□□ -1.25
CLCN3-203ENST00000502998 DYTNA2CJ06 578 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 CCDC162PA2VCL2 907 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 GTPBP10A4D1E9 387 aaKnown RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 IQCA1LA6NCM1 817 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 CYP27B1O15528 508 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 TMCC1O94876 653 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 FSBPO95073 299 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 MBD3O95983 291 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 FGAP02671 866 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 RPN1P04843 607 aaKnown RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 CD9P21926 228 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 GBP2P32456 591 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 KIF5BP33176 963 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 TUBA4AP68366 448 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 CBX3Q13185 183 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 TXNRD1Q16881 649 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 TRIM71Q2Q1W2 868 aaKnown RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 LRRFIP1Q32MZ4 808 aaKnown RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 TTC39BQ5VTQ0 682 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 IRGCQ6NXR0 463 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 MIS18BP1Q6P0N0 1132 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 ZNF804AQ7Z570 1209 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 RAB11FIP4Q86YS3 637 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 WDR75Q8IWA0 830 aaKnown RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 EFCAB3Q8N7B9 438 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 PAF1Q8N7H5 531 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 PPP1R14CQ8TAE6 165 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 SPOCK2Q92563 424 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 TBC1D31Q96DN5 1066 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 SPAG5Q96R06 1193 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 TSC22D3Q99576 134 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms