RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 TM4SF1P30408 202 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 NR5A1Q13285 461 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 AP3B2Q13367 1082 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 FOXR2Q6PJQ5 311 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 CABP7Q86V35 215 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 METTL16Q86W50 562 aaKnown RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 TSGA10Q9BZW7 698 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 USP40Q9NVE5 1235 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 FANCLQ9NW38 375 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PI4KBQ9UBF8 816 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 DDX60Q8IY21 1712 aaKnown RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 KLRG2A4D1S0 409 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 H0YHG0 523 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 USO1O60763 962 aaKnown RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 USP17L8P0C7I0 530 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 GYS1P13807 737 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 SARNPP82979 210 aaKnown RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PPP2R3AQ06190 1150 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 TNIP1Q15025 636 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PKN1Q16512 942 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PCMTD1Q96MG8 357 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-203ENST00000502773 RIC8AQ9NPQ8 531 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 TCEAL9Q9UHQ7 104 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
PDGFC-203ENST00000502773 PES1O00541 588 aaKnown RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 ATP8B1O43520 1251 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 ACTN4O43707 911 aaKnown RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 CLSTN1O94985 981 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 PLEKHA8P1O95397 391 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 GTF2IP78347 998 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 TRIM47Q96LD4 638 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 DISC1Q9NRI5 854 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 PYCARDQ9ULZ3 195 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 IGSF22Q8N9C0 903 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 SPATA20Q8TB22 786 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 NUP88Q99567 741 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 DNAI1Q9UI46 699 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 PPP1R12BO60237 982 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 TOB1P50616 345 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 RBM5P52756 815 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 FUT2Q10981 343 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 CALCRLQ16602 461 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 KLHL10Q6JEL2 608 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 CCDC65Q8IXS2 484 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 RPGRIP1Q96KN7 1286 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 RTFDC1Q9BY42 306 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 ABCB11O95342 1321 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 PLIN4Q96Q06 1357 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 A0A1W2PQC6 194 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 SNAP23O00161 211 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 RASA1P20936 1047 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 DPYDQ12882 1025 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 SPA17Q15506 151 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 STRIP1Q5VSL9 837 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 MOXD1Q6UVY6 613 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 OGFOD1Q8N543 542 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 GINM1Q9NU53 330 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 STK32BQ9NY57 414 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 LRWD1Q9UFC0 647 aa8.29□□□□□ -1.08
PDGFC-203ENST00000502773 LUC7L2Q9Y383 392 aaKnown RBP8.29□□□□□ -1.08
PDGFC-203ENST00000502773 MAST2Q6P0Q8 1798 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 BMS1Q14692 1282 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 TXNRD1Q16881 649 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 LEKR1Q6ZMV7 388 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 EDEM3Q9BZQ6 932 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 NYAP2Q9P242 653 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 LIMA1Q9UHB6 759 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 COL5A3P25940 1745 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 CCNT1O60563 726 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 ENTPD3O75355 529 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 KRT18P05783 430 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 GUCY1A2P33402 732 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 USP11P51784 963 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 ASIC1P78348 528 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 TMEM179Q6ZVK1 233 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 ADGRA1Q86SQ6 560 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 NELFBQ8WX92 580 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 CTDP1Q9Y5B0 961 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 FLT1P17948 1338 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 C10orf71Q711Q0 1435 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 RIOK3O14730 519 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 EPS15P42566 896 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 MTIF2P46199 727 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 TNNI2P48788 182 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 CKAP4Q07065 602 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 IKQ13123 557 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 LETM2Q2VYF4 491 aa8.28□□□□□ -1.08
PDGFC-203ENST00000502773 RBM26Q5T8P6 1007 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
PDGFC-203ENST00000502773 DAAM1Q9Y4D1 1078 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms