RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 RMDN2Q96LZ7 410 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 DTX3LQ8TDB6 740 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 DHX38Q92620 1227 aaKnown RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 ESRRBO95718 433 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 MARCKSP29966 332 aaPredicted RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 SFMBT2Q5VUG0 894 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 STAM2O75886 525 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 WDR47O94967 919 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 AP1S2P56377 157 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 ANKRD42Q8N9B4 389 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 TRIM33Q9UPN9 1127 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 LZTS3O60299 673 aaPredicted RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 ADCK1Q86TW2 530 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 DNAJC17Q9NVM6 304 aaKnown RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 IVNS1ABPQ9Y6Y0 642 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 ZNF233A6NK53 670 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 H7C0S8 307 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 KIF1CO43896 1103 aaKnown RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 LUZP2Q86TE4 346 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 CSGALNACT2Q8N6G5 542 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 ZNF229Q9UJW7 825 aa12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 CAB39Q9Y376 341 aaPredicted RBP12.18□□□□□ -0.46
AC055713.1-201ENST00000498967 SETD1BQ9UPS6 1966 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 RHOBTB1O94844 696 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 RARSP54136 660 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 RASSF7Q02833 373 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 TSTA3Q13630 321 aaPredicted RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 ALS2CLQ60I27 953 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 FAM81BQ96LP2 452 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 GOLGA8TH3BQL2 631 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 GOLGA8HP0CJ92 632 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 CD19P15391 556 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 COPB1P53618 953 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 KLHL30Q0D2K2 578 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 ELMSAN1Q6PJG2 1045 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 TRIM63Q969Q1 353 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 NDE1Q9NXR1 346 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 BASP1P80723 227 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 TLK2Q86UE8 772 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 HORMAD1Q86X24 394 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 NOSTRINQ8IVI9 506 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 AZI2Q9H6S1 392 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 PAPOLBQ9NRJ5 636 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 SLC5A4Q9NY91 659 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 HSPA1AP0DMV8 641 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 HSPA1BP0DMV9 641 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 ACTN1P12814 892 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 OCRLQ01968 901 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 STX3Q13277 289 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 CATSPER1Q8NEC5 780 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 GOLGA8JA6NMD2 632 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 RASSF9O75901 435 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 GUCY1A3Q02108 690 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 CEP78Q5JTW2 689 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 C16orf62Q7Z3J2 963 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 RCN2Q14257 317 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 CAPRIN1Q14444 709 aaKnown RBP12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 TMEM259Q4ZIN3 620 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
AC055713.1-201ENST00000498967 EIF2S1P05198 315 aaKnown RBP12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 PPP4R4Q6NUP7 873 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 CFAP36Q96G28 342 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 KIF14Q15058 1648 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 KRIT1O00522 736 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 GNL1P36915 607 aaPredicted RBP12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 TLK1Q9UKI8 766 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 USTQ9Y2C2 406 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 MAGEA1P43355 309 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 ATF2P15336 505 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 ITKQ08881 620 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 LONRF2Q1L5Z9 754 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 MCMDC2Q4G0Z9 681 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 USP48Q86UV5 1035 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 A6NJR5 290 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms