RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 IRX5P78411 483 aaPredicted RBP14.4□□□□□ -0.1
THBS3-209ENST00000498500 ACVR2BQ13705 512 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 ADGRE1Q14246 886 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 GNASQ5JWF2 1037 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 C12orf60Q5U649 245 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 MAMDC4Q6UXC1 1216 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 REPS2Q8NFH8 660 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 TEX13BQ9BXU2 312 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 TSPYL2Q9H2G4 693 aaPredicted RBP14.4□□□□□ -0.1
THBS3-209ENST00000498500 MTIF3Q9H2K0 278 aaKnown RBP14.4□□□□□ -0.1
THBS3-209ENST00000498500 NKX2-4Q9H2Z4 354 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 SLC28A3Q9HAS3 691 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 TTC41PQ6P2S7 1318 aa14.4□□□□□ -0.1
THBS3-209ENST00000498500 USP17L12C9JPN9 530 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 USP17L21D6R901 530 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 SMIM22K7EJ46 135 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 CYP2C18P33260 490 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 C16orf86Q6ZW13 317 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 GPATCH3Q96I76 525 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 SLF1Q9BQI6 1058 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 ABHD16BQ9H3Z7 469 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 IL23AQ9NPF7 189 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 RIPK3Q9Y572 518 aa14.39□□□□□ -0.11
THBS3-209ENST00000498500 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
THBS3-209ENST00000498500 FGBP02675 491 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 GJA9P57773 515 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 UBE3CQ15386 1083 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 CCDC144BQ3MJ40 725 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 ZNF467Q7Z7K2 595 aaPredicted RBP14.38□□□□□ -0.11
THBS3-209ENST00000498500 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 SMC5Q8IY18 1101 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 CPXCR1Q8N123 301 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 KBTBD3Q8NAB2 608 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
THBS3-209ENST00000498500 NUP88Q99567 741 aaPredicted RBP14.38□□□□□ -0.11
THBS3-209ENST00000498500 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.38□□□□□ -0.11
THBS3-209ENST00000498500 CXXC1Q9P0U4 656 aaPredicted RBP14.38□□□□□ -0.11
THBS3-209ENST00000498500 DNAJC25-GNG10A0A024R161 153 aa14.37□□□□□ -0.11
THBS3-209ENST00000498500 ADCY6O43306 1168 aa14.37□□□□□ -0.11
THBS3-209ENST00000498500 ZBED4O75132 1171 aa14.37□□□□□ -0.11
THBS3-209ENST00000498500 MX1P20591 662 aa14.37□□□□□ -0.11
THBS3-209ENST00000498500 ANKRD35Q8N283 1001 aa14.37□□□□□ -0.11
THBS3-209ENST00000498500 MICALL1Q8N3F8 863 aa14.37□□□□□ -0.11
THBS3-209ENST00000498500 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.37□□□□□ -0.11
THBS3-209ENST00000498500 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
THBS3-209ENST00000498500 GREB1LQ9C091 1923 aaPredicted RBP14.37□□□□□ -0.11
THBS3-209ENST00000498500 IGHDP01880 384 aa14.36□□□□□ -0.11
THBS3-209ENST00000498500 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
THBS3-209ENST00000498500 NOL8Q76FK4 1167 aaKnown RBP14.36□□□□□ -0.11
THBS3-209ENST00000498500 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
THBS3-209ENST00000498500 OTOP2Q7RTS6 562 aa14.36□□□□□ -0.11
THBS3-209ENST00000498500 PRPF38AQ8NAV1 312 aaKnown RBP14.36□□□□□ -0.11
THBS3-209ENST00000498500 YBX2Q9Y2T7 364 aaKnown RBP14.36□□□□□ -0.11
THBS3-209ENST00000498500 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
THBS3-209ENST00000498500 CHD9Q3L8U1 2897 aa14.36□□□□□ -0.11
THBS3-209ENST00000498500 F5H6K3 240 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 CD4P01730 458 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 IRX6P78412 446 aaPredicted RBP14.35□□□□□ -0.11
THBS3-209ENST00000498500 BEX3Q00994 111 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 KLRC3Q07444 240 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 PPP2R2DQ66LE6 453 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 NECAB3Q96P71 396 aaPredicted RBP14.35□□□□□ -0.11
THBS3-209ENST00000498500 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 PUS7LQ9H0K6 701 aaKnown RBP14.35□□□□□ -0.11
THBS3-209ENST00000498500 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 RAVER2Q9HCJ3 691 aaKnown RBP14.35□□□□□ -0.11
THBS3-209ENST00000498500 REV3LO60673 3130 aa14.35□□□□□ -0.11
THBS3-209ENST00000498500 ERC2O15083 957 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 RABGGTBP53611 331 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 CCL23P55773 120 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 SKIV2LQ15477 1246 aaKnown RBP14.34□□□□□ -0.11
THBS3-209ENST00000498500 AAK1Q2M2I8 961 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 CXCL17Q6UXB2 119 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 STK11IPQ8N1F8 1099 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 OSBP2Q969R2 916 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 KIFC2Q96AC6 838 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.34□□□□□ -0.11
THBS3-209ENST00000498500 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 FBXO40Q9UH90 709 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 SLC4A7Q9Y6M7 1214 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 UMODL1Q5DID0 1318 aa14.34□□□□□ -0.11
THBS3-209ENST00000498500 CHD7Q9P2D1 2997 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 ZBBXA8MT70 800 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 ATP2A1O14983 1001 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 CABYRO75952 493 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 NDUFB10O96000 172 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 BMP1P13497 986 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 PDE1AP54750 535 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 TNFAIP2Q03169 654 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 TFF2Q03403 129 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 ITGA7Q13683 1181 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.12
THBS3-209ENST00000498500 CHST13Q8NET6 341 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 APPBP2Q92624 585 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 FGD4Q96M96 766 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms