RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 KBTBD13C9JR72 458 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 ZNF213O14771 459 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 PLA2G6O60733 806 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
HMGXB4-207ENST00000498212 LRRC26Q2I0M4 334 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 GJC2Q5T442 439 aaPredicted RBP10□□□□□ -0.81
HMGXB4-207ENST00000498212 KCTD1Q719H9 257 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 RASGRP2Q7LDG7 609 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 ANKRD35Q8N283 1001 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 ARRDC4Q8NCT1 418 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 DCAF4Q8WV16 495 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 SENP6Q9GZR1 1112 aaPredicted RBP10□□□□□ -0.81
HMGXB4-207ENST00000498212 PRO3102Q9H379 93 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 RNF41Q9H4P4 317 aaPredicted RBP10□□□□□ -0.81
HMGXB4-207ENST00000498212 TCP11L1Q9NUJ3 509 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 ZMYND8Q9ULU4 1186 aaPredicted RBP10□□□□□ -0.81
HMGXB4-207ENST00000498212 CNPY2Q9Y2B0 182 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 TOP1P11387 765 aaKnown RBP9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 SYN1P17600 705 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 PDE4AP27815 886 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 CCDC96Q2M329 555 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 TTC22Q5TAA0 569 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 ZNF467Q7Z7K2 595 aaPredicted RBP9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 TBC1D10CQ8IV04 446 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 MSL3Q8N5Y2 521 aaKnown RBP9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 ESR2Q92731 530 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 AGBL1Q96MI9 1066 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 TMEM47Q9BQJ4 181 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 ACAD9Q9H845 621 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 HOMER2Q9NSB8 354 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 PRR12Q9ULL5 1215 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 ZNF536O15090 1300 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 NEDD4P46934 1319 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 SYNGAP1Q96PV0 1343 aa9.99□□□□□ -0.81
HMGXB4-207ENST00000498212 ZNF865P0CJ78 1059 aaPredicted RBP9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 RARBP10826 455 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 ALAS1P13196 640 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 AKR1A1P14550 325 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 GSPT1P15170 499 aaKnown RBP9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 TAL1P17542 331 aaPredicted RBP9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 NT5C2P49902 561 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 SNAP25P60880 206 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 LRRC41Q15345 812 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 TKFCQ3LXA3 575 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 CCDC174Q6PII3 467 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 MAMDC4Q6UXC1 1216 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 TTC14Q96N46 770 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 XPNPEP3Q9NQH7 507 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 FRMPD2Q68DX3 1309 aaPredicted RBP9.98□□□□□ -0.81
HMGXB4-207ENST00000498212 CEP290O15078 2479 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 A0A1W2PPC1 479 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 SNAI1O95863 264 aaPredicted RBP9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 PDHBP11177 359 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 SLC16A2P36021 539 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 ATN1P54259 1190 aaPredicted RBP9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 IMMTQ16891 758 aaKnown RBP9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 TTBK2Q6IQ55 1244 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 BTNL9Q6UXG8 535 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 IQCA1Q86XH1 822 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 FGD4Q96M96 766 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 TRERF1Q96PN7 1200 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 GDF15Q99988 308 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 ZKSCAN3Q9BRR0 538 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 GPCPD1Q9NPB8 672 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 A1CFQ9NQ94 594 aaKnown RBP9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 ZHX1Q9UKY1 873 aaPredicted RBP9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 FAM184BQ9ULE4 1060 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 CCPG1Q9ULG6 757 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 RAD50Q92878 1312 aa9.97□□□□□ -0.81
HMGXB4-207ENST00000498212 POTEB2H3BUK9 544 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 KDM4AO75164 1064 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 PGK1P00558 417 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 ICAM1P05362 532 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 BMP8BP34820 402 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 ADCYAP1R1P41586 468 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 MAGEA10P43363 369 aaPredicted RBP9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 RTP1P59025 263 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 CNTN2Q02246 1040 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 ACVR2BQ13705 512 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 CCDC178Q5BJE1 867 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 MUM1L1Q5H9M0 696 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 SYDE2Q5VT97 1194 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 SLC39A5Q6ZMH5 540 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 ARMCX2Q7L311 632 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 RNF180Q86T96 592 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 DGKHQ86XP1 1220 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 FAM133AQ8N9E0 248 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 RUFY2Q8WXA3 655 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 IL25Q9H293 177 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 RANBP17Q9H2T7 1088 aaKnown RBP9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 ABHD16BQ9H3Z7 469 aa9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
HMGXB4-207ENST00000498212 ASB14A6NK59 587 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 B4E1Z4 1266 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 ADAMTS4O75173 837 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 SNHG28P0DPA3 235 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms