RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SNAP25P60880 206 aa22.01■■□□□ 1.11
PRKCB-209ENST00000498058 CNTN2Q02246 1040 aa22.01■■□□□ 1.11
PRKCB-209ENST00000498058 ACVR2BQ13705 512 aa22.01■■□□□ 1.11
PRKCB-209ENST00000498058 ANKRD35Q8N283 1001 aa22.01■■□□□ 1.11
PRKCB-209ENST00000498058 CHST13Q8NET6 341 aa22.01■■□□□ 1.11
PRKCB-209ENST00000498058 GMCL1Q96IK5 515 aa22.01■■□□□ 1.11
PRKCB-209ENST00000498058 FAM161BQ96MY7 647 aa22.01■■□□□ 1.11
PRKCB-209ENST00000498058 CTDP1Q9Y5B0 961 aaPredicted RBP22.01■■□□□ 1.11
PRKCB-209ENST00000498058 DDX49Q9Y6V7 483 aaKnown RBP22.01■■□□□ 1.11
PRKCB-209ENST00000498058 A0A0C4DFX4 3053 aa22■■□□□ 1.11
PRKCB-209ENST00000498058 PQBP1O60828 265 aaKnown RBP22■■□□□ 1.11
PRKCB-209ENST00000498058 CLTBP09497 229 aa22■■□□□ 1.11
PRKCB-209ENST00000498058 KCNA10Q16322 511 aa22■■□□□ 1.11
PRKCB-209ENST00000498058 FAM109BQ6ICB4 259 aaPredicted RBP22■■□□□ 1.11
PRKCB-209ENST00000498058 KCTD1Q719H9 257 aa22■■□□□ 1.11
PRKCB-209ENST00000498058 ARMCX2Q7L311 632 aa22■■□□□ 1.11
PRKCB-209ENST00000498058 STAG1Q8WVM7 1258 aa22■■□□□ 1.11
PRKCB-209ENST00000498058 TSEN34Q9BSV6 310 aaKnown RBP22■■□□□ 1.11
PRKCB-209ENST00000498058 LCTP09848 1927 aa22■■□□□ 1.11
PRKCB-209ENST00000498058 SOWAHBA6NEL2 793 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 KIAA0355O15063 1070 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 DUSP11O75319 330 aaKnown RBP21.99■■□□□ 1.11
PRKCB-209ENST00000498058 SLC3A2P08195 630 aaKnown RBP21.99■■□□□ 1.11
PRKCB-209ENST00000498058 NOVP48745 357 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 STAT2P52630 851 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 PDE1AP54750 535 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 FAAP100Q0VG06 881 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 CCDC144BQ3MJ40 725 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 FAM133AQ8N9E0 248 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 FAM227BQ96M60 508 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 A1CFQ9NQ94 594 aaKnown RBP21.99■■□□□ 1.11
PRKCB-209ENST00000498058 FBXO40Q9UH90 709 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 ANAPC4Q9UJX5 808 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 ASTN1O14525 1302 aa21.99■■□□□ 1.11
PRKCB-209ENST00000498058 A0A0D9SFI3 127 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 TSPY2A6NKD2 308 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 CTAGE5O15320 804 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 PTGS1P23219 599 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 SLC1A4P43007 532 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 CCDC144CPQ8IYA2 1237 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 EVI5LQ96CN4 794 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 RNF146Q9NTX7 359 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 ISY1Q9ULR0 285 aaKnown RBP21.98■■□□□ 1.11
PRKCB-209ENST00000498058 STX8Q9UNK0 236 aa21.98■■□□□ 1.11
PRKCB-209ENST00000498058 LRRC37A2A6NM11 1700 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.97■■□□□ 1.11
PRKCB-209ENST00000498058 DLL1O00548 723 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 FGRP09769 529 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 MUM1L1Q5H9M0 696 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 RCSD1Q6JBY9 416 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 ANKRD33Q7Z3H0 272 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 FAM160B2Q86V87 743 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 CHURC1Q8WUH1 139 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 UPF3AQ9H1J1 476 aaKnown RBP21.97■■□□□ 1.11
PRKCB-209ENST00000498058 ABHD16BQ9H3Z7 469 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 ACAD9Q9H845 621 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 STARD7Q9NQZ5 370 aa21.97■■□□□ 1.11
PRKCB-209ENST00000498058 PLA2G6O60733 806 aa21.96■■□□□ 1.11
PRKCB-209ENST00000498058 FDX1P10109 184 aa21.96■■□□□ 1.11
PRKCB-209ENST00000498058 CST5P28325 142 aaPredicted RBP21.96■■□□□ 1.11
PRKCB-209ENST00000498058 GJA9P57773 515 aa21.96■■□□□ 1.11
PRKCB-209ENST00000498058 HDAC1Q13547 482 aaPredicted RBP21.96■■□□□ 1.11
PRKCB-209ENST00000498058 ALX1Q15699 326 aa21.96■■□□□ 1.11
PRKCB-209ENST00000498058 CCDC174Q6PII3 467 aa21.96■■□□□ 1.11
PRKCB-209ENST00000498058 PRR12Q9ULL5 1215 aa21.96■■□□□ 1.11
PRKCB-209ENST00000498058 MTMR7Q9Y216 660 aa21.96■■□□□ 1.11
PRKCB-209ENST00000498058 MOXD2PA6NHM9 499 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 ORC4O43929 436 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 RANBP6O60518 1105 aaKnown RBP21.95■■□□□ 1.1
PRKCB-209ENST00000498058 FGAP02671 866 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 C6orf222P0C671 652 aaPredicted RBP21.95■■□□□ 1.1
PRKCB-209ENST00000498058 ALAS1P13196 640 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 CDK7P50613 346 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 IKQ13123 557 aaPredicted RBP21.95■■□□□ 1.1
PRKCB-209ENST00000498058 TTBK2Q6IQ55 1244 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 ZNF589Q86UQ0 364 aaPredicted RBP21.95■■□□□ 1.1
PRKCB-209ENST00000498058 TOX2Q96NM4 488 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 PURBQ96QR8 312 aaKnown RBP21.95■■□□□ 1.1
PRKCB-209ENST00000498058 HELLSQ9NRZ9 838 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 TMEM39AQ9NV64 488 aa21.95■■□□□ 1.1
PRKCB-209ENST00000498058 ASGR1P07306 291 aa21.94■■□□□ 1.1
PRKCB-209ENST00000498058 RAG1P15918 1043 aa21.94■■□□□ 1.1
PRKCB-209ENST00000498058 TMEM63BQ5T3F8 832 aa21.94■■□□□ 1.1
PRKCB-209ENST00000498058 NUP133Q8WUM0 1156 aa21.94■■□□□ 1.1
PRKCB-209ENST00000498058 TTYH1Q9H313 450 aaPredicted RBP21.94■■□□□ 1.1
PRKCB-209ENST00000498058 BEX3Q00994 111 aa21.93■■□□□ 1.1
PRKCB-209ENST00000498058 ZNF697Q5TEC3 545 aa21.93■■□□□ 1.1
PRKCB-209ENST00000498058 SEMA6BQ9H3T3 888 aa21.93■■□□□ 1.1
PRKCB-209ENST00000498058 TBX21Q9UL17 535 aa21.93■■□□□ 1.1
PRKCB-209ENST00000498058 HSPD1P10809 573 aaKnown RBP21.92■■□□□ 1.1
PRKCB-209ENST00000498058 SLC16A2P36021 539 aa21.92■■□□□ 1.1
PRKCB-209ENST00000498058 NKX3-2P78367 333 aa21.92■■□□□ 1.1
PRKCB-209ENST00000498058 NMIQ13287 307 aaPredicted RBP21.92■■□□□ 1.1
PRKCB-209ENST00000498058 TKFCQ3LXA3 575 aa21.92■■□□□ 1.1
PRKCB-209ENST00000498058 MCMDC2Q4G0Z9 681 aa21.92■■□□□ 1.1
PRKCB-209ENST00000498058 LNPKQ9C0E8 428 aa21.92■■□□□ 1.1
PRKCB-209ENST00000498058 PDGFCQ9NRA1 345 aa21.92■■□□□ 1.1
PRKCB-209ENST00000498058 GNEQ9Y223 722 aaKnown RBP21.92■■□□□ 1.1
PRKCB-209ENST00000498058 UNC80Q8N2C7 3258 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms