RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 WDR78Q5VTH9 848 aa18.89■□□□□ 0.61
FAM3A-220ENST00000497506 FBXO46Q6PJ61 603 aaPredicted RBP18.89■□□□□ 0.61
FAM3A-220ENST00000497506 NBPF11Q86T75 865 aa18.89■□□□□ 0.61
FAM3A-220ENST00000497506 RAB11FIP4Q86YS3 637 aa18.89■□□□□ 0.61
FAM3A-220ENST00000497506 USP6NLQ92738 828 aa18.89■□□□□ 0.61
FAM3A-220ENST00000497506 BRF1Q92994 677 aa18.89■□□□□ 0.61
FAM3A-220ENST00000497506 JMJD4Q9H9V9 463 aa18.89■□□□□ 0.61
FAM3A-220ENST00000497506 PTCH2Q9Y6C5 1203 aa18.89■□□□□ 0.61
FAM3A-220ENST00000497506 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
FAM3A-220ENST00000497506 BAZ2BQ9UIF8 2168 aaKnown RBP18.89■□□□□ 0.61
FAM3A-220ENST00000497506 KLF18A0A0U1RQI7 1052 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 ICAM1P05362 532 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 COPB2P35606 906 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 APOBRQ0VD83 1088 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 TOB2Q14106 344 aaPredicted RBP18.88■□□□□ 0.61
FAM3A-220ENST00000497506 FANCBQ8NB91 859 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 CTCFLQ8NI51 663 aaPredicted RBP18.88■□□□□ 0.61
FAM3A-220ENST00000497506 RIOX1Q9H6W3 641 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 ZNF236Q9UL36 1845 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 MYH6P13533 1939 aa18.88■□□□□ 0.61
FAM3A-220ENST00000497506 SLC15A5A6NIM6 579 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 ZBTB43O43298 467 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 CYTH3O43739 400 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 STRNO43815 780 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 KIF5BP33176 963 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 EVCP57679 992 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 IRF5Q13568 498 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 GRB14Q14449 540 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 SYNE3Q6ZMZ3 975 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 MICU3Q86XE3 530 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 CCDC144CPQ8IYA2 1237 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 MTMR8Q96EF0 704 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 CWC22Q9HCG8 908 aaKnown RBP18.87■□□□□ 0.61
FAM3A-220ENST00000497506 VAT1LQ9HCJ6 419 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 IVNS1ABPQ9Y6Y0 642 aa18.87■□□□□ 0.61
FAM3A-220ENST00000497506 TAL1P17542 331 aaPredicted RBP18.86■□□□□ 0.61
FAM3A-220ENST00000497506 RBM25P49756 843 aaKnown RBP18.86■□□□□ 0.61
FAM3A-220ENST00000497506 CDC37Q16543 378 aaPredicted RBP18.86■□□□□ 0.61
FAM3A-220ENST00000497506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.86■□□□□ 0.61
FAM3A-220ENST00000497506 CHST13Q8NET6 341 aa18.86■□□□□ 0.61
FAM3A-220ENST00000497506 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
FAM3A-220ENST00000497506 KIF2CQ99661 725 aa18.86■□□□□ 0.61
FAM3A-220ENST00000497506 BACH2Q9BYV9 841 aa18.86■□□□□ 0.61
FAM3A-220ENST00000497506 CCPG1Q9ULG6 757 aa18.86■□□□□ 0.61
FAM3A-220ENST00000497506 HPS5Q9UPZ3 1129 aa18.86■□□□□ 0.61
FAM3A-220ENST00000497506 DHX16O60231 1041 aaKnown RBP18.85■□□□□ 0.61
FAM3A-220ENST00000497506 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 FCER1AP12319 257 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 ALAS1P13196 640 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 SMARCA1P28370 1054 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 GNAQP50148 359 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 RCAN1P53805 252 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 MAP2K5Q13163 448 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 QRICH1Q2TAL8 776 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 TKFCQ3LXA3 575 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 ABRAQ8N0Z2 381 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 SRBD1Q8N5C6 995 aaKnown RBP18.85■□□□□ 0.61
FAM3A-220ENST00000497506 RAET1EQ8TD07 263 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 LZTS2Q9BRK4 669 aa18.85■□□□□ 0.61
FAM3A-220ENST00000497506 ALDH8A1Q9H2A2 487 aaPredicted RBP18.85■□□□□ 0.61
FAM3A-220ENST00000497506 FAM217BQ9NTX9 383 aaPredicted RBP18.85■□□□□ 0.61
FAM3A-220ENST00000497506 CYP2B6P20813 491 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 ADORA2AP29274 412 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 MUM1L1Q5H9M0 696 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 TMTC3Q6ZXV5 915 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 TNS4Q8IZW8 715 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 TRERF1Q96PN7 1200 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 PIGSQ96S52 555 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 MMP19Q99542 508 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 SPZ1Q9BXG8 430 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 HOMER2Q9NSB8 354 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 RNF146Q9NTX7 359 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 FBXO40Q9UH90 709 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 PNMA2Q9UL42 364 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 HTTP42858 3142 aa18.84■□□□□ 0.61
FAM3A-220ENST00000497506 NID2Q14112 1375 aa18.83■□□□□ 0.61
FAM3A-220ENST00000497506 GOLGA8AA7E2F4 631 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 GOLGA8BA8MQT2 603 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 ZBTB5O15062 677 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 ADCY3O60266 1144 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 PPP1R11O60927 126 aaPredicted RBP18.83■□□□□ 0.6
FAM3A-220ENST00000497506 COBLO75128 1261 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 HOXC6P09630 235 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 XRCC5P13010 732 aaKnown RBP18.83■□□□□ 0.6
FAM3A-220ENST00000497506 CDC27P30260 824 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 RGS2P41220 211 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 RTN1Q16799 776 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 CMTR1Q8N1G2 835 aaKnown RBP18.83■□□□□ 0.6
FAM3A-220ENST00000497506 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.6
FAM3A-220ENST00000497506 ACAD9Q9H845 621 aa18.83■□□□□ 0.6
FAM3A-220ENST00000497506 RBM28Q9NW13 759 aaKnown RBP18.83■□□□□ 0.6
FAM3A-220ENST00000497506 NAP1L2Q9ULW6 460 aaPredicted RBP18.83■□□□□ 0.6
FAM3A-220ENST00000497506 PLXNA1Q9UIW2 1896 aa18.82■□□□□ 0.6
FAM3A-220ENST00000497506 ELNP15502 786 aa18.82■□□□□ 0.6
FAM3A-220ENST00000497506 PDIA3P30101 505 aaKnown RBP18.82■□□□□ 0.6
FAM3A-220ENST00000497506 METAP2P50579 478 aaKnown RBP eCLIP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms