RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.4
RNF220-218ENST00000497469 LINC01553A4QN01 128 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 LDHCP07864 332 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 KCNJ6P48051 423 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 GSTO1P78417 241 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 ACVR2BQ13705 512 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 SMAD2Q15796 467 aaKnown RBP17.51■□□□□ 0.39
RNF220-218ENST00000497469 KIAA1755Q5JYT7 1200 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 PI16Q6UXB8 463 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 MB21D1Q8N884 522 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 C17orf80Q9BSJ5 609 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 SIP14410 1827 aa17.51■□□□□ 0.39
RNF220-218ENST00000497469 STXBP3O00186 592 aa17.5■□□□□ 0.39
RNF220-218ENST00000497469 FLOT1O75955 427 aa17.5■□□□□ 0.39
RNF220-218ENST00000497469 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
RNF220-218ENST00000497469 DEFB103AP81534 67 aa17.5■□□□□ 0.39
RNF220-218ENST00000497469 WDR87Q6ZQQ6 2873 aa17.5■□□□□ 0.39
RNF220-218ENST00000497469 ASTN1O14525 1302 aa17.49■□□□□ 0.39
RNF220-218ENST00000497469 MBTPS2O43462 519 aa17.49■□□□□ 0.39
RNF220-218ENST00000497469 GALR2O43603 387 aaPredicted RBP17.49■□□□□ 0.39
RNF220-218ENST00000497469 PDGFBP01127 241 aaPredicted RBP17.49■□□□□ 0.39
RNF220-218ENST00000497469 RPAINQ86UA6 219 aa17.49■□□□□ 0.39
RNF220-218ENST00000497469 FBXO22Q8NEZ5 403 aa17.49■□□□□ 0.39
RNF220-218ENST00000497469 MRPL38Q96DV4 380 aaKnown RBP17.49■□□□□ 0.39
RNF220-218ENST00000497469 A0A1W2PRG0 241 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 SLC25A27O95847 323 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 LTBRP36941 435 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 WDR5P61964 334 aaKnown RBP17.48■□□□□ 0.39
RNF220-218ENST00000497469 DLX2Q07687 328 aaPredicted RBP17.48■□□□□ 0.39
RNF220-218ENST00000497469 MKRN4PQ13434 485 aaPredicted RBP17.48■□□□□ 0.39
RNF220-218ENST00000497469 ABCB5Q2M3G0 1257 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 FAM117BQ6P1L5 589 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 BANK1Q8NDB2 785 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 ASIC4Q96FT7 647 aa17.48■□□□□ 0.39
RNF220-218ENST00000497469 ALDH8A1Q9H2A2 487 aaPredicted RBP17.48■□□□□ 0.39
RNF220-218ENST00000497469 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.48■□□□□ 0.39
RNF220-218ENST00000497469 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.47■□□□□ 0.39
RNF220-218ENST00000497469 GUCY1A2P33402 732 aa17.47■□□□□ 0.39
RNF220-218ENST00000497469 SIGLEC14Q08ET2 396 aa17.47■□□□□ 0.39
RNF220-218ENST00000497469 NOL8Q76FK4 1167 aaKnown RBP17.47■□□□□ 0.39
RNF220-218ENST00000497469 PPP1R13LQ8WUF5 828 aa17.47■□□□□ 0.39
RNF220-218ENST00000497469 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
RNF220-218ENST00000497469 NOL10Q9BSC4 688 aaKnown RBP17.47■□□□□ 0.39
RNF220-218ENST00000497469 CEP126Q9P2H0 1117 aa17.47■□□□□ 0.39
RNF220-218ENST00000497469 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
RNF220-218ENST00000497469 MAP1BP46821 2468 aaKnown RBP17.46■□□□□ 0.39
RNF220-218ENST00000497469 SEPT2Q15019 361 aa17.46■□□□□ 0.39
RNF220-218ENST00000497469 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
RNF220-218ENST00000497469 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
RNF220-218ENST00000497469 TATDN1Q6P1N9 297 aa17.46■□□□□ 0.39
RNF220-218ENST00000497469 SPICE1Q8N0Z3 855 aa17.46■□□□□ 0.39
RNF220-218ENST00000497469 ZNF292O60281 2723 aa17.46■□□□□ 0.39
RNF220-218ENST00000497469 COL11A1P12107 1806 aaPredicted RBP17.45■□□□□ 0.38
RNF220-218ENST00000497469 CABYRO75952 493 aa17.45■□□□□ 0.38
RNF220-218ENST00000497469 COL19A1Q14993 1142 aa17.45■□□□□ 0.38
RNF220-218ENST00000497469 RIOX2Q8IUF8 465 aa17.45■□□□□ 0.38
RNF220-218ENST00000497469 KIAA2013Q8IYS2 634 aa17.45■□□□□ 0.38
RNF220-218ENST00000497469 TNKSO95271 1327 aa17.45■□□□□ 0.38
RNF220-218ENST00000497469 TET1Q8NFU7 2136 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 BAIAP3O94812 1187 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 IQCF3P0C7M6 154 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 HOXB3P14651 431 aaPredicted RBP17.44■□□□□ 0.38
RNF220-218ENST00000497469 RFC2P35250 354 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 ACAP1Q15027 740 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 FSCN1Q16658 493 aaKnown RBP17.44■□□□□ 0.38
RNF220-218ENST00000497469 PTPROQ16827 1216 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 MAMDC4Q6UXC1 1216 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
RNF220-218ENST00000497469 CABP5Q9NP86 173 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 HMG20BQ9P0W2 317 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 TANC1Q9C0D5 1861 aa17.44■□□□□ 0.38
RNF220-218ENST00000497469 TIMM10P62072 90 aa17.43■□□□□ 0.38
RNF220-218ENST00000497469 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
RNF220-218ENST00000497469 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
RNF220-218ENST00000497469 TLK2Q86UE8 772 aa17.43■□□□□ 0.38
RNF220-218ENST00000497469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.43■□□□□ 0.38
RNF220-218ENST00000497469 RAD9AQ99638 391 aa17.43■□□□□ 0.38
RNF220-218ENST00000497469 FOCADQ5VW36 1801 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 USP24Q9UPU5 2620 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 VAMP4O75379 141 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 GJB5O95377 273 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 STAT3P40763 770 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 SMAD4Q13485 552 aaKnown RBP17.42■□□□□ 0.38
RNF220-218ENST00000497469 PUM1Q14671 1186 aaKnown RBP eCLIP17.42■□□□□ 0.387e-7■□□□□ 9.3
RNF220-218ENST00000497469 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
RNF220-218ENST00000497469 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 MCM3APO60318 1980 aa17.42■□□□□ 0.38
RNF220-218ENST00000497469 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
RNF220-218ENST00000497469 BAG3O95817 575 aa17.41■□□□□ 0.38
RNF220-218ENST00000497469 NKX3-2P78367 333 aa17.41■□□□□ 0.38
RNF220-218ENST00000497469 TNFAIP2Q03169 654 aa17.41■□□□□ 0.38
RNF220-218ENST00000497469 TCTN1Q2MV58 587 aa17.41■□□□□ 0.38
RNF220-218ENST00000497469 ABHD16BQ9H3Z7 469 aa17.41■□□□□ 0.38
RNF220-218ENST00000497469 PARP14Q460N5 1801 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms