RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 NECAB2Q7Z6G3 386 aa12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 DIS3LQ8TF46 1054 aaKnown RBP12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 ZSCAN10Q96SZ4 725 aaPredicted RBP12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 KRT23Q9C075 422 aa12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 MAF1Q9H063 256 aa12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 TAF6LQ9Y6J9 622 aa12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 PFASO15067 1338 aa12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 SYNGAP1Q96PV0 1343 aa12.83□□□□□ -0.36
SHROOM3-210ENST00000497440 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 RAD21O60216 631 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 ICAM1P05362 532 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 NKX3-2P78367 333 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 NECTIN1Q15223 517 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 CPXCR1Q8N123 301 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 MORC4Q8TE76 937 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 LSG1Q9H089 658 aaKnown RBP12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 CWC22Q9HCG8 908 aaKnown RBP12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 FRMPD3Q5JV73 1810 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 WDR19Q8NEZ3 1342 aa12.82□□□□□ -0.36
SHROOM3-210ENST00000497440 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 SYDE2Q5VT97 1194 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 STOX1Q6ZVD7 989 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 CYB5R4Q7L1T6 521 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 RGS22Q8NE09 1264 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 CLEC4DQ8WXI8 215 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 MTMR8Q96EF0 704 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 ESYT1Q9BSJ8 1104 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 MTA3Q9BTC8 594 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 TOMM22Q9NS69 142 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 PNMA2Q9UL42 364 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 ASTN1O14525 1302 aa12.81□□□□□ -0.36
SHROOM3-210ENST00000497440 LOC102724159A0A0B4J2E5 919 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 H0YGN5 161 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 DNM1LO00429 736 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 SLC16A2P36021 539 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 PWP2Q15269 919 aaKnown RBP12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 IGDCC4Q8TDY8 1250 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 ZKSCAN3Q9BRR0 538 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 TNKSO95271 1327 aa12.8□□□□□ -0.36
SHROOM3-210ENST00000497440 PALM3A6NDB9 673 aaPredicted RBP12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 E7EWF7 191 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 GHRHRQ02643 423 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 TROAPQ12815 778 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 SNX17Q15036 470 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 MUM1L1Q5H9M0 696 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 C1orf53Q5VUE5 145 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 SKAP1Q86WV1 359 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 MB21D2Q8IYB1 491 aaPredicted RBP12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 ABHD16BQ9H3Z7 469 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 CYP39A1Q9NYL5 469 aa12.79□□□□□ -0.36
SHROOM3-210ENST00000497440 LCTP09848 1927 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 ADAMTS4O75173 837 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 ANTXR2P58335 489 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 CNTN2Q02246 1040 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 SLC35G1Q2M3R5 365 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 TSGA10IPQ3SY00 556 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 ASPRV1Q53RT3 343 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 ARRDC4Q8NCT1 418 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 KLHDC9Q8NEP7 349 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 MCM3APO60318 1980 aa12.78□□□□□ -0.36
SHROOM3-210ENST00000497440 CTAGE5O15320 804 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 SNAP25P60880 206 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 ACVR2BQ13705 512 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 LRRC41Q15345 812 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 CCDC96Q2M329 555 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 ERICH6BQ5W0A0 696 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 NCOA7Q8NI08 942 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 MAP3K14Q99558 947 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 JMJD4Q9H9V9 463 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 GPCPD1Q9NPB8 672 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.37
SHROOM3-210ENST00000497440 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 NFIBO00712 420 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 ADCY6O43306 1168 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 DUSP11O75319 330 aaKnown RBP12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 ALAS1P13196 640 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 AKR1A1P14550 325 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms