RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-208ENST00000497287 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 TRAF5O00463 557 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 CXCL11O14625 94 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 FIBPO43427 364 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 ZBED4O75132 1171 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 CELF2O95319 508 aaKnown RBP8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 HSPA6P17066 643 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 VCAM1P19320 739 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 ADCY7P51828 1080 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 MRPL12P52815 198 aaKnown RBP8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 HMGCS2P54868 508 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 USP17L24Q0WX57 530 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 NR5A1Q13285 461 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 PPIL2Q13356 520 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 RILPL1Q5EBL4 403 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 MOB2Q70IA6 237 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 TMEM87AQ8NBN3 555 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 COA7Q96BR5 231 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 SHISA4Q96DD7 197 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 SLC10A4Q96EP9 437 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 SPATA32Q96LK8 384 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 RANBP17Q9H2T7 1088 aaKnown RBP8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 GBA2Q9HCG7 927 aaPredicted RBP8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 RIC8AQ9NPQ8 531 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 TFIP11Q9UBB9 837 aaKnown RBP8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 PNMA2Q9UL42 364 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 PCDHA1Q9Y5I3 950 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 PHIPQ8WWQ0 1821 aa8.38□□□□□ -1.07
GPATCH4-208ENST00000497287 ELP1O95163 1332 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 A0A0G2JLL6 359 aaPredicted RBP8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 CCDC194A0A1B0GVG4 234 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 FLOT1O75955 427 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 YEATS4O95619 227 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 TRAPPC10P48553 1259 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 SNAP25P60880 206 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 NBR1Q14596 966 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 STK38Q15208 465 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 NPY5RQ15761 445 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 ANO1Q5XXA6 986 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 CCDC174Q6PII3 467 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 SAMD1Q6SPF0 538 aaPredicted RBP8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 CATSPERGQ6ZRH7 1159 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 KRT25Q7Z3Z0 450 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 PRRT2Q7Z6L0 340 aaPredicted RBP8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 LEO1Q8WVC0 666 aaPredicted RBP8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 CUL5Q93034 780 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 TNFRSF25Q93038 417 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 OPTNQ96CV9 577 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 OTUD5Q96G74 571 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 CHAMP1Q96JM3 812 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 CLMNQ96JQ2 1002 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 USP28Q96RU2 1077 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 GDPD2Q9HCC8 539 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 LMBRD1Q9NUN5 540 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 FBXO28Q9NVF7 368 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 RCOR1Q9UKL0 485 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 PPP1R9AQ9ULJ8 1098 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 PCDHA6Q9UN73 950 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 CEP131Q9UPN4 1083 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 KCNH4Q9UQ05 1017 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 MRPL11Q9Y3B7 192 aaKnown RBP8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 PCDHA8Q9Y5H6 950 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 PAPPA2Q9BXP8 1791 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 OTOFQ9HC10 1997 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 MYH15Q9Y2K3 1946 aa8.37□□□□□ -1.07
GPATCH4-208ENST00000497287 ABCB11O95342 1321 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 MYPNQ86TC9 1320 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 GOLGA6L4A6NEF3 574 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 M0R2N6 131 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 IRF6O14896 467 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 PPP1R11O60927 126 aaPredicted RBP8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 BMP15O95972 392 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 MBD3O95983 291 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 DSG3P32926 999 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 NASPP49321 788 aaPredicted RBP8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 UBE2HP62256 183 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 CEBPZQ03701 1054 aaKnown RBP8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 FSTL1Q12841 308 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 PABPC4Q13310 644 aaKnown RBP eCLIP8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 DGKZQ13574 1117 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 COG2Q14746 738 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 SF3A1Q15459 793 aaKnown RBP8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 USH1GQ495M9 461 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 MCTP2Q6DN12 878 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 GADL1Q6ZQY3 521 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 PIK3AP1Q6ZUJ8 805 aa8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 FASTKD5Q7L8L6 764 aaKnown RBP8.36□□□□□ -1.07
GPATCH4-208ENST00000497287 REXO1Q8N1G1 1221 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms