RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PTH1RQ03431 593 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 RCN2Q14257 317 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 KRT24Q2M2I5 525 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 PPP1R15BQ5SWA1 713 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 TRPM8Q7Z2W7 1104 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 PSMB7Q99436 277 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 PAGR1Q9BTK6 254 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 DDX23Q9BUQ8 820 aaKnown RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 PICK1Q9NRD5 415 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 NFU1Q9UMS0 254 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 TSC22D4Q9Y3Q8 395 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 NUB1Q9Y5A7 615 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 YTHDC2Q9H6S0 1430 aaKnown RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 TRPM1Q7Z4N2 1603 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 SPECC1L-ADORA2AF8WAN1 911 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 POSTNQ15063 836 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 ZMYM1Q5SVZ6 1142 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 BEND3Q5T5X7 828 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 OLFML2BQ68BL8 750 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 SNRNP27Q8WVK2 155 aaKnown RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 PPP1R9AQ9ULJ8 1098 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 PCDHA5Q9Y5H7 936 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 KDM5AP29375 1690 aaKnown RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 KDRP35968 1356 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 GRIN2DO15399 1336 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 MAP3K7O43318 606 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 MLH1P40692 756 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 PDE6CP51160 858 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 MAP3K12Q12852 859 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 CBX3Q13185 183 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 NMIQ13287 307 aaPredicted RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 INAQ16352 499 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 RAD9BQ6WBX8 426 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 LINC00301Q8NCQ3 95 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9□□□□□ -0.97
CRNKL1-205ENST00000496549 TRIM11Q96F44 468 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 XAGE2Q96GT9 111 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 RBM17Q96I25 401 aaKnown RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 VPS16Q9H269 839 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 SYCP2Q9BX26 1530 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 PPP1R42Q7Z4L9 355 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 LRRC8CQ8TDW0 803 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 CATSPER2Q96P56 530 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 POLR3EQ9NVU0 708 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 CD2APQ9Y5K6 639 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 ADGRL2O95490 1459 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 DPPA5A6NC42 116 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 ERCC5P28715 1186 aaPredicted RBP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 CYLC2Q14093 348 aaPredicted RBP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 KLC3Q6P597 504 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 CNBD1Q8NA66 436 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 ENGASEQ8NFI3 743 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 WDR60Q8WVS4 1066 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 MAML3Q96JK9 1138 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 NUDCD1Q96RS6 583 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.99□□□□□ -0.971e-5■■■■□ 19.8
CRNKL1-205ENST00000496549 RNF14Q9UBS8 474 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 FRMD4BQ9Y2L6 1034 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 RABGAP1Q9Y3P9 1069 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 POGZQ7Z3K3 1410 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 MAGEA13PA6NCF6 341 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 IGF2BP3O00425 579 aaKnown RBP eCLIP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 RGS16O15492 202 aaPredicted RBP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 ATP1A1P05023 1023 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 MMEP08473 750 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 PDE1CQ14123 709 aaPredicted RBP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 LBRQ14739 615 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 TDRD12Q587J7 1177 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 SPATA1Q5VX52 437 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 MCUR1Q96AQ8 359 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 SIKE1Q9BRV8 207 aa8.99□□□□□ -0.97
CRNKL1-205ENST00000496549 PHF20L1A8MW92 1017 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 H0Y3Z8 333 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 ATP5HO75947 161 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 TMED10P49755 219 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 PLCD1P51178 756 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 AIMP1Q12904 312 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 TRAPPC11Q7Z392 1133 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 ARHGAP24Q8N264 748 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 KRI1Q8N9T8 703 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 CEP70Q8NHQ1 597 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 MMTAG2Q9BU76 263 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 THEGQ9P2T0 379 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 SH3GLB1Q9Y371 365 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 ARAP3Q8WWN8 1544 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 E7ENQ6 273 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 PSMD14O00487 310 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 NVLO15381 856 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 GNAT2P19087 354 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 SERPINB3P29508 390 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 ATP5DP30049 168 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 MSH2P43246 934 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 ITIH4Q14624 930 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 LACTB2Q53H82 288 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 IRGCQ6NXR0 463 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 C16orf87Q6PH81 154 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 DHX32Q7L7V1 743 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 MIER3Q7Z3K6 550 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 CNKSR1Q969H4 720 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 BORCS6Q96GS4 357 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms