RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	EEF2	P13639	858 aa	Known RBP	9.46	□□□□□ -0.9
NVL-223	ENST00000496393	CSF2RA	P15509	400 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	STAT3	P40763	770 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	ADGRE1	Q14246	886 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	KCNA10	Q16322	511 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	TMEM240	Q5SV17	173 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	C16orf59	Q7L2K0	433 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	FTSJ3	Q8IY81	847 aa	Known RBP	9.46	□□□□□ -0.9
NVL-223	ENST00000496393	MICALL1	Q8N3F8	863 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	NUP133	Q8WUM0	1156 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	VTI1A	Q96AJ9	217 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	NECAB3	Q96P71	396 aa	Predicted RBP	9.46	□□□□□ -0.9
NVL-223	ENST00000496393	UHRF1	Q96T88	793 aa	Predicted RBP	9.46	□□□□□ -0.9
NVL-223	ENST00000496393	SWAP70	Q9UH65	585 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	ZNF214	Q9UL59	606 aa	Predicted RBP	9.46	□□□□□ -0.9
NVL-223	ENST00000496393	PPP1R9A	Q9ULJ8	1098 aa		9.46	□□□□□ -0.9
NVL-223	ENST00000496393	GBF1	Q92538	1859 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	MCM3AP	O60318	1980 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	TCRBV5S4A2T	A0A5A2	114 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	ADCY6	O43306	1168 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	SNAI1	O95863	264 aa	Predicted RBP	9.45	□□□□□ -0.9
NVL-223	ENST00000496393	RLBP1	P12271	317 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	CYP2C18	P33260	490 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	CDK8	P49336	464 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	PPIG	Q13427	754 aa	Known RBP eCLIP	9.45	□□□□□ -0.9
NVL-223	ENST00000496393	TTF1	Q15361	905 aa	Predicted RBP	9.45	□□□□□ -0.9
NVL-223	ENST00000496393	SNRNP48	Q6IEG0	339 aa	Known RBP	9.45	□□□□□ -0.9
NVL-223	ENST00000496393	MFSD5	Q6N075	450 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	CEP85	Q6P2H3	762 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	ZNF365	Q70YC5	407 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	STK11IP	Q8N1F8	1099 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	KLHDC9	Q8NEP7	349 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	IL27	Q8NEV9	243 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	REPS2	Q8NFH8	660 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	GLT1D1	Q96MS3	346 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	TOX2	Q96NM4	488 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	ASB2	Q96Q27	587 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	NKX2-4	Q9H2Z4	354 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	FAM184B	Q9ULE4	1060 aa		9.45	□□□□□ -0.9
NVL-223	ENST00000496393	MOXD2P	A6NHM9	499 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	ASGR1	P07306	291 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	CCSAP	Q6IQ19	270 aa	Predicted RBP	9.44	□□□□□ -0.9
NVL-223	ENST00000496393	CPXCR1	Q8N123	301 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	ATXN2L	Q8WWM7	1075 aa	Known RBP	9.44	□□□□□ -0.9
NVL-223	ENST00000496393	DDX11	Q96FC9	970 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	TSEN34	Q9BSV6	310 aa	Known RBP	9.44	□□□□□ -0.9
NVL-223	ENST00000496393	GOPC	Q9HD26	462 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	9.44	□□□□□ -0.9
NVL-223	ENST00000496393	CXXC1	Q9P0U4	656 aa	Predicted RBP	9.44	□□□□□ -0.9
NVL-223	ENST00000496393	ADAMTS5	Q9UNA0	930 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	DIS3	Q9Y2L1	958 aa	Known RBP	9.44	□□□□□ -0.9
NVL-223	ENST00000496393	YBX2	Q9Y2T7	364 aa	Known RBP	9.44	□□□□□ -0.9
NVL-223	ENST00000496393	RIPK3	Q9Y572	518 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	CHD9	Q3L8U1	2897 aa		9.44	□□□□□ -0.9
NVL-223	ENST00000496393	TCF20	Q9UGU0	1960 aa	Known RBP	9.43	□□□□□ -0.9
NVL-223	ENST00000496393	UMODL1	Q5DID0	1318 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	MROH7	Q68CQ1	1323 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	SYNGAP1	Q96PV0	1343 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	USP17L12	C9JPN9	530 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	USP17L21	D6R901	530 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	DUSP11	O75319	330 aa	Known RBP	9.43	□□□□□ -0.9
NVL-223	ENST00000496393	PTGS1	P23219	599 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	RABGGTB	P53611	331 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	MRPS5	P82675	430 aa	Known RBP	9.43	□□□□□ -0.9
NVL-223	ENST00000496393	BEX3	Q00994	111 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	CCDC144B	Q3MJ40	725 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	AKNAD1	Q5T1N1	836 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	C12orf60	Q5U649	245 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	RASIP1	Q5U651	963 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	PSRC1	Q6PGN9	363 aa	Predicted RBP	9.43	□□□□□ -0.9
NVL-223	ENST00000496393	CCDC174	Q6PII3	467 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	TMED8	Q6PL24	325 aa	Predicted RBP	9.43	□□□□□ -0.9
NVL-223	ENST00000496393	ERC1	Q8IUD2	1116 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	FAM126B	Q8IXS8	530 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	TMEM199	Q8N511	208 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	CCDC17	Q96LX7	622 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	SLF1	Q9BQI6	1058 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	TEX13B	Q9BXU2	312 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	MSRA	Q9UJ68	235 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	BDP1	A6H8Y1	2624 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	NCOR1	O75376	2440 aa		9.43	□□□□□ -0.9
NVL-223	ENST00000496393	ELP1	O95163	1332 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393		A0A0U1RQG5	324 aa	Predicted RBP	9.42	□□□□□ -0.9
NVL-223	ENST00000496393	ARVCF	O00192	962 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	NDUFB10	O96000	172 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	MYOG	P15173	224 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	COPB2	P35606	906 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	ADD2	P35612	726 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	PLA2G5	P39877	138 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	CDK7	P50613	346 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	TFF2	Q03403	129 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	ACVR2B	Q13705	512 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	RAB30	Q15771	203 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	GNAS	Q5JWF2	1037 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	C16orf86	Q6ZW13	317 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	NOL8	Q76FK4	1167 aa	Known RBP	9.42	□□□□□ -0.9
NVL-223	ENST00000496393	OTOP2	Q7RTS6	562 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	AMOTL1	Q8IY63	956 aa		9.42	□□□□□ -0.9
NVL-223	ENST00000496393	PCSK9	Q8NBP7	692 aa	Known RBP	9.42	□□□□□ -0.9
NVL-223	ENST00000496393	RHPN1	Q8TCX5	695 aa		9.42	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms