RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZNF512BQ96KM6 892 aaPredicted RBP6.17□□□□□ -1.42
CLK1-214ENST00000496205 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLK1-214ENST00000496205 A0A1B0GTL3 188 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 MINDY4BA8MYZ0 360 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 TLR3O15455 904 aaKnown RBP6.16□□□□□ -1.42
CLK1-214ENST00000496205 CTSKP43235 329 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 KCNC1P48547 511 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 PSMD2Q13200 908 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 TMC4Q7Z404 712 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 RELL1Q8IUW5 271 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 BACH2Q9BYV9 841 aa6.16□□□□□ -1.42
CLK1-214ENST00000496205 A0A1W2PQ45 241 aaPredicted RBP6.15□□□□□ -1.42
CLK1-214ENST00000496205 A0A1W2PQY0 241 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 MEIS1O00470 390 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 TMEM62Q0P6H9 643 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 PLEKHN1Q494U1 663 aaPredicted RBP6.15□□□□□ -1.42
CLK1-214ENST00000496205 VWA3BQ502W6 1294 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 SNAP47Q5SQN1 464 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 ZFYVE27Q5T4F4 411 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 JMJD8Q96S16 334 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 RSRP1Q9BUV0 290 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 CHST7Q9NS84 486 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 IMPACTQ9P2X3 320 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 PLA2G2DQ9UNK4 145 aa6.15□□□□□ -1.42
CLK1-214ENST00000496205 ZNF205O95201 554 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 MSL3P1P0C860 447 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 TCF3P15923 654 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 ZNF200P98182 395 aaPredicted RBP6.14□□□□□ -1.43
CLK1-214ENST00000496205 CAP1Q01518 475 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 FAM196AQ6ZSG2 479 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 FERMT3Q86UX7 667 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 CDADC1Q9BWV3 514 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 BRMS1Q9HCU9 246 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 AP5S1Q9NUS5 200 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 PCDHB14Q9Y5E9 798 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 HCFC2Q9Y5Z7 792 aa6.14□□□□□ -1.43
CLK1-214ENST00000496205 IGSF3O75054 1194 aa6.13□□□□□ -1.43
CLK1-214ENST00000496205 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
CLK1-214ENST00000496205 MAPKAPK2P49137 400 aa6.13□□□□□ -1.43
CLK1-214ENST00000496205 MVKQ03426 396 aa6.13□□□□□ -1.43
CLK1-214ENST00000496205 CDCP2Q5VXM1 449 aa6.13□□□□□ -1.43
CLK1-214ENST00000496205 OVOS1Q6IE37 1185 aa6.13□□□□□ -1.43
CLK1-214ENST00000496205 LSRQ86X29 649 aaPredicted RBP6.13□□□□□ -1.43
CLK1-214ENST00000496205 GFOD1Q9NXC2 390 aa6.13□□□□□ -1.43
CLK1-214ENST00000496205 GMIPQ9P107 970 aa6.13□□□□□ -1.43
CLK1-214ENST00000496205 ATE1O95260 518 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 VAV1P15498 845 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 FBLN1P23142 703 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 BMP8BP34820 402 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 HDLBPQ00341 1268 aaKnown RBP6.12□□□□□ -1.43
CLK1-214ENST00000496205 XPCQ01831 940 aaPredicted RBP6.12□□□□□ -1.43
CLK1-214ENST00000496205 MLECQ14165 292 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 C9orf131Q5VYM1 1079 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 FBXL19Q6PCT2 694 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 ZC3H14Q6PJT7 736 aaKnown RBP6.12□□□□□ -1.43
CLK1-214ENST00000496205 FNIP1Q8TF40 1166 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 SPATA25Q9BR10 227 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 CNNM2Q9H8M5 875 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 SUSD2Q9UGT4 822 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 MYRFQ9Y2G1 1151 aa6.12□□□□□ -1.43
CLK1-214ENST00000496205 CLEC3AO75596 197 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 ATF2P15336 505 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 RTP2Q5QGT7 225 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 UBXN11Q5T124 520 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 NT5DC1Q5TFE4 455 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 CRTC3Q6UUV7 619 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 LIPIQ6XZB0 460 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 TMEM192Q8IY95 271 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 NLGN1Q8N2Q7 840 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 ATG4CQ96DT6 458 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 GPR20Q99678 358 aa6.11□□□□□ -1.43
CLK1-214ENST00000496205 K7ESM1 405 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 SORBS3O60504 671 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 PFKLP17858 780 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 FOXO4P98177 505 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 RAD51AP2Q09MP3 1159 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 NR1I3Q14994 352 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 CWF19L2Q2TBE0 894 aaKnown RBP6.1□□□□□ -1.43
CLK1-214ENST00000496205 METTL16Q86W50 562 aaKnown RBP6.1□□□□□ -1.43
CLK1-214ENST00000496205 ZNF526Q8TF50 670 aaPredicted RBP6.1□□□□□ -1.43
CLK1-214ENST00000496205 CRELD1Q96HD1 420 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 COPRSQ9NQ92 184 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 VTI1BQ9UEU0 232 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 DUSP10Q9Y6W6 482 aa6.1□□□□□ -1.43
CLK1-214ENST00000496205 AKAP8O43823 692 aaKnown RBP6.09□□□□□ -1.43
CLK1-214ENST00000496205 FANCCQ00597 558 aa6.09□□□□□ -1.43
CLK1-214ENST00000496205 DLX2Q07687 328 aaPredicted RBP6.09□□□□□ -1.43
CLK1-214ENST00000496205 PWP1Q13610 501 aa6.09□□□□□ -1.43
CLK1-214ENST00000496205 LRRC3Q9BY71 257 aa6.09□□□□□ -1.43
CLK1-214ENST00000496205 ANTXR1Q9H6X2 564 aa6.09□□□□□ -1.43
CLK1-214ENST00000496205 KBTBD4Q9NVX7 518 aa6.09□□□□□ -1.43
CLK1-214ENST00000496205 FBXL21Q9UKT6 434 aa6.09□□□□□ -1.43
CLK1-214ENST00000496205 CNOT11Q9UKZ1 510 aaKnown RBP6.09□□□□□ -1.43
CLK1-214ENST00000496205 GREM1O60565 184 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 DBHP09172 617 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 ENDOUP21128 410 aaKnown RBP6.08□□□□□ -1.44
CLK1-214ENST00000496205 MAGEA10P43363 369 aaPredicted RBP6.08□□□□□ -1.44
CLK1-214ENST00000496205 CRKP46108 304 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 HTRA3P83110 453 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 TARBP2Q15633 366 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms