RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 AGBL1Q96MI9 1066 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 TMEM47Q9BQJ4 181 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 ACAD9Q9H845 621 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 HOMER2Q9NSB8 354 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 PRR12Q9ULL5 1215 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 ZNFX1Q9P2E3 1918 aaKnown RBP15.03■□□□□ -0
PTPRF-214ENST00000496043 PARP14Q460N5 1801 aa15.02■□□□□ -0
PTPRF-214ENST00000496043 POTEB2H3BUK9 544 aa15.02■□□□□ -0
PTPRF-214ENST00000496043 RTP1P59025 263 aa15.02■□□□□ -0
PTPRF-214ENST00000496043 CCDC96Q2M329 555 aa15.02■□□□□ -0
PTPRF-214ENST00000496043 ESR2Q92731 530 aa15.02■□□□□ -0
PTPRF-214ENST00000496043 TRERF1Q96PN7 1200 aa15.02■□□□□ -0
PTPRF-214ENST00000496043 PRKAG2Q9UGJ0 569 aa15.02■□□□□ -0
PTPRF-214ENST00000496043 MYH4Q9Y623 1939 aa15.02□□□□□ -0.01
PTPRF-214ENST00000496043 COL11A1P12107 1806 aaPredicted RBP15.01□□□□□ -0.01
PTPRF-214ENST00000496043 ZNF536O15090 1300 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 ALAS1P13196 640 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 NT5C2P49902 561 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 SNAP25P60880 206 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 ACVR2BQ13705 512 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 CCDC178Q5BJE1 867 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 CCDC174Q6PII3 467 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 BTNL9Q6UXG8 535 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 UBE2OQ9C0C9 1292 aaKnown RBP15.01□□□□□ -0.01
PTPRF-214ENST00000496043 ABHD16BQ9H3Z7 469 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 RNF146Q9NTX7 359 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.01□□□□□ -0.01
PTPRF-214ENST00000496043 CTNNA3Q9UI47 895 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 ATP11BQ9Y2G3 1177 aa15.01□□□□□ -0.01
PTPRF-214ENST00000496043 TRIOBPQ9H2D6 2365 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 PGK1P00558 417 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 SLC16A2P36021 539 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 CNTN2Q02246 1040 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 TTBK2Q6IQ55 1244 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
PTPRF-214ENST00000496043 TSEN34Q9BSV6 310 aaKnown RBP15□□□□□ -0.01
PTPRF-214ENST00000496043 DSCC1Q9BVC3 393 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 GPCPD1Q9NPB8 672 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 ZHX1Q9UKY1 873 aaPredicted RBP15□□□□□ -0.01
PTPRF-214ENST00000496043 PHF24Q9UPV7 400 aa15□□□□□ -0.01
PTPRF-214ENST00000496043 ASB14A6NK59 587 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 DUSP11O75319 330 aaKnown RBP14.99□□□□□ -0.01
PTPRF-214ENST00000496043 MDM2Q00987 491 aaPredicted RBP14.99□□□□□ -0.01
PTPRF-214ENST00000496043 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 C1orf53Q5VUE5 145 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 ARMCX2Q7L311 632 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 DGKHQ86XP1 1220 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 TBC1D10CQ8IV04 446 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 FAM133AQ8N9E0 248 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 A1CFQ9NQ94 594 aaKnown RBP14.99□□□□□ -0.01
PTPRF-214ENST00000496043 CCPG1Q9ULG6 757 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 ALPK3Q96L96 1907 aa14.99□□□□□ -0.01
PTPRF-214ENST00000496043 ICAM1P05362 532 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 PDE4AP27815 886 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 IRX6P78412 446 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-214ENST00000496043 IMMTQ16891 758 aaKnown RBP14.98□□□□□ -0.01
PTPRF-214ENST00000496043 IQCA1Q86XH1 822 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 CCDC144CPQ8IYA2 1237 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 TDHQ8IZJ6 230 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 FGD4Q96M96 766 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 RANBP17Q9H2T7 1088 aaKnown RBP14.98□□□□□ -0.01
PTPRF-214ENST00000496043 SPC25Q9HBM1 224 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 PNMA2Q9UL42 364 aa14.98□□□□□ -0.01
PTPRF-214ENST00000496043 FRMPD2Q68DX3 1309 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-214ENST00000496043 SMCHD1A6NHR9 2005 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 SOWAHBA6NEL2 793 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 KDM4AO75164 1064 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 ADAMTS4O75173 837 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 PDHBP11177 359 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 SNX17Q15036 470 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 KCNA10Q16322 511 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 CCDC144BQ3MJ40 725 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 TRIM60Q495X7 471 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 MUM1L1Q5H9M0 696 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 TTC22Q5TAA0 569 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 RASGRP2Q7LDG7 609 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 KLHDC9Q8NEP7 349 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 NUP133Q8WUM0 1156 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 ZKSCAN3Q9BRR0 538 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 CYP39A1Q9NYL5 469 aa14.97□□□□□ -0.01
PTPRF-214ENST00000496043 MOXD2PA6NHM9 499 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 ACLYP53396 1101 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 TLE2Q04725 743 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 ZNF543Q08ER8 600 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 LRIT3Q3SXY7 679 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 GPATCH4Q5T3I0 446 aaKnown RBP14.96□□□□□ -0.01
PTPRF-214ENST00000496043 NSMFQ6X4W1 530 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 PCSK9Q8NBP7 692 aaKnown RBP14.96□□□□□ -0.01
PTPRF-214ENST00000496043 RUFY2Q8WXA3 655 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 ANKS1AQ92625 1134 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 LENG1Q96BZ8 264 aaPredicted RBP14.96□□□□□ -0.01
PTPRF-214ENST00000496043 KRT23Q9C075 422 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 ZSWIM5Q9P217 1185 aa14.96□□□□□ -0.01
PTPRF-214ENST00000496043 NEDD4P46934 1319 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 SYNRGQ9UMZ2 1314 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 A0A1W2PQ45 241 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-214ENST00000496043 A0A1W2PQY0 241 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 SOX1O00570 391 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-214ENST00000496043 C6orf222P0C671 652 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms