RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 NDUFB10O96000 172 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 NR5A1Q13285 461 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 STK38Q15208 465 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 RILPL1Q5EBL4 403 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 NBPF12Q5TAG4 269 aaPredicted RBP12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 PRAMEF18Q5VWM3 479 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 TTBK2Q6IQ55 1244 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 CAVIN1Q6NZI2 390 aaKnown RBP12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 KCTD1Q719H9 257 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 LINC00301Q8NCQ3 95 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 KCNG4Q8TDN1 519 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 GPKOWQ92917 476 aaPredicted RBP eCLIP12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 TNFRSF25Q93038 417 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 PGBD1Q96JS3 809 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 ZNF341Q9BYN7 854 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 FTOQ9C0B1 505 aaKnown RBP eCLIP12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 SH2D4AQ9H788 454 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 VAT1LQ9HCJ6 419 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 PCDHA4Q9UN74 947 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 PNMA6FA0A0J9YX94 578 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 RAD21O60216 631 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 BMP3P12645 472 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 GSE1Q14687 1217 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 SLC39A14Q15043 492 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 HEATR3Q7Z4Q2 680 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 HOMER1Q86YM7 354 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 ADGRF4Q8IZF3 695 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 BLIDQ8IZY5 108 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 ZNF112Q9UJU3 913 aa12.31□□□□□ -0.44
ECHDC3-204ENST00000495787 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 SPTLC2O15270 562 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 TOB1P50616 345 aaPredicted RBP12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 NAPAP54920 295 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 PTPAQ15257 358 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 ARMC9Q7Z3E5 817 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 ACER1Q8TDN7 264 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 ZMYND12Q9H0C1 365 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 C6orf50Q9HD87 102 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 TRIM17Q9Y577 477 aa12.3□□□□□ -0.44
ECHDC3-204ENST00000495787 MKI67P46013 3256 aaKnown RBP12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 USP17L10C9JJH3 530 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 ZBTB5O15062 677 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 PPP6R2O75170 966 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 GNA11P29992 359 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 SLC16A2P36021 539 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 ME1P48163 572 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 TRAPPC10P48553 1259 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 SUPT20HL1Q3ZLR7 823 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 SPRYD7Q5W111 196 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 ADALQ6DHV7 355 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 BICD2Q8TD16 824 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 R3HDMLQ9H3Y0 253 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 VCPKMTQ9H867 229 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 PCDHA7Q9UN72 937 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 CEP131Q9UPN4 1083 aa12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
ECHDC3-204ENST00000495787 HTTP42858 3142 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 A0A1W2PQ27 194 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 A0A1W2PQ64 194 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 A0A1W2PQD8 194 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 SMCO2A6NFE2 343 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 MANSC4A6NHS7 340 aaPredicted RBP12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 M0R2N6 131 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 PLA2G6O60733 806 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 INHBEP58166 350 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 CCDC183Q5T5S1 534 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 SCYL3Q8IZE3 742 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 PCDHA6Q9UN73 950 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 PCDHA8Q9Y5H6 950 aa12.28□□□□□ -0.44
ECHDC3-204ENST00000495787 FAM205CA6NFA0 338 aa12.27□□□□□ -0.45
ECHDC3-204ENST00000495787 TRIM75PA6NK02 468 aa12.27□□□□□ -0.45
ECHDC3-204ENST00000495787 LETM1O95202 739 aaPredicted RBP12.27□□□□□ -0.45
ECHDC3-204ENST00000495787 BMP15O95972 392 aa12.27□□□□□ -0.45
ECHDC3-204ENST00000495787 LIG1P18858 919 aa12.27□□□□□ -0.45
ECHDC3-204ENST00000495787 INPP5BP32019 993 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms